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BaseInfo

ncRNA ID novel_zma_miR10795
Species Zea mays
Class miRNA
Genome position Chr4:210652841-210653021 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 158 - AAACACGAACUCUGUCGGUCACCC - 181
Stem-loop(if miRNA) --         -   GC                -      G  G   GAAA      C           GC           C    GCCU
  GUGACCGAC GAG  CGUGUUUAUGACAAGA CAUGUG UC UGC    UUUCGG AGCAUAACCCC  UGUUCUCCAAU GCAC    A
  ||||||||| |||  |||||||||||||||| |||||| || |||    |||||| |||||||||||  ||||||||||| ||||    A
  CACUGGCUG CUC  GCACAAAUACUGUUUU GUACAC AG ACG    AAAGCC UCGUAUUGGGG  ACAAGAGGUUA CGUG    A
CC         U   AA                C      G  G   AAUC      U           AU           A    GUAA
Stem-loop sequence GUGACCGACGAGGCCGUGUUUAUGACAAGACAUGUGGUCGUGCGAAAUUUCGGCAGCAUAACCCCGCUGUUCUCCAAUCGCACGCCUAAAAAUGGUGCAAUUGGAGAACAUAGGGGUUAUGCUUCCGAAACUAAGCAGGAGCACAUGCUUUUGUCAUAAACACGAACUCUGUCGGUCACCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020548028.1
ncRNA:24   CCC--ACUGGCUGUCUCAAGCACAAA   1
  *||--|||||||=|*|||||||||||
targets:78   AGGAUUGACCGAUAAAGUUCGUGUUU   103

2.5 PREDICTED: Zea mays uncharacterized LOC103625748 (LOC103625748), mRNA NA coding protein psRNATarget