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BaseInfo

ncRNA ID	novel_zma_miR10794
Species	Zea mays
Class	miRNA
Genome position	Chr4:210393320-210393453 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	114 - CAAAAUACAAAAAAUUCGGCC - 134
Stem-loop(if miRNA)	--                                     A           C   A      AAAAU   CCGAAUUUUUUGUAUUUUGGCCAUUUUUCGGAAAAAA CAUGUUUGGAC CUA AAAAUU     G   ||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||     C   GGCUUAAAAAACAUAAAACCGGUAAAAAGCCUUUUUU GUGCAAACCUG GAU UUUUAA     A CC                                     -           U   C      AAUUA
Stem-loop sequence	CCGAAUUUUUUGUAUUUUGGCCAUUUUUCGGAAAAAAACAUGUUUGGACCCUAAAAAAUUAAAAUGCAAUUAAAAUUUUCUAGUGUCCAAACGUGUUUUUUCCGAAAAAUGGCCAAAAUACAAAAAAUUCGGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020551601.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   ||||||||||||||||||||* targets:2363   GGCCGAAUUUUUUGUAUUUUA   2383 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100285690 (pco114328(55)), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001158581.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   ||||||||||||||||||||* targets:2344   GGCCGAAUUUUUUGUAUUUUA   2364 Target Full Sequence	1.0	Zea mays uncharacterized LOC100285690 (pco114328(55)), mRNA	NA	coding protein	psRNATarget
EU973445.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   ||||||||||||||||||||* targets:2344   GGCCGAAUUUUUUGUAUUUUA   2364 Target Full Sequence	1.0	Zea mays clone 398924 NADPH adrenodoxin oxidoreductase mRNA, complete cds	NA	coding protein	psRNATarget
BT039513.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   *|||||||||||||||||||* targets:1450   UGCCGAAUUUUUUGUAUUUUA   1470 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0016P03 mRNA, complete cds	NA	coding protein	psRNATarget
EU961230.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   *|||||||||||||||||||* targets:986   UGCCGAAUUUUUUGUAUUUUA   1006 Target Full Sequence	1.0	Zea mays clone 233696 mRNA sequence	NA	coding protein	psRNATarget
XM_008666063.2	ncRNA:21   CC-GGCUUAAAAAACAUAAAAC   1   ||-||||||||||||||||||* targets:1142   GGACCGAAUUUUUUGUAUUUUA   1163 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized protein At1g28695 (LOC103642897), mRNA	NA	coding protein	psRNATarget
BT061472.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*||||||||||||||||||* targets:1245   GACCGAAUUUUUUGUAUUUUA   1265 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0150I01 mRNA, complete cds	NA	coding protein	psRNATarget
EU968229.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |||||*||||||||||||||* targets:767   GGCCGUAUUUUUUGUAUUUUA   787 Target Full Sequence	2.0	Zea mays clone 317082 mRNA sequence	NA	coding protein	psRNATarget
DQ246205.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*||||||||||||||||||* targets:784   GCCCGAAUUUUUUGUAUUUUA   804 Target Full Sequence	1.0	Zea mays clone 21429 mRNA sequence	NA	coding protein	psRNATarget
XM_020551170.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   **||||||||||||||||||* targets:1911   AACCGAAUUUUUUGUAUUUUA   1931 Target Full Sequence	1.0	PREDICTED: Zea mays subtilisin-like protease SBT3.10 (LOC103652446), transcript variant X4, mRNA	NA	coding protein	psRNATarget
BT034188.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   **||||||||||||||||||* targets:558   CCCCGAAUUUUUUGUAUUUUA   578 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0029I19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137355.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   **||||||||||||||||||* targets:558   CCCCGAAUUUUUUGUAUUUUA   578 Target Full Sequence	1.0	Zea mays SAUR56-auxin-responsive SAUR family member (LOC100191931), mRNA	NA	coding protein	psRNATarget
XM_008661512.2	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*||||||||||||*|||||| targets:2270   GCCCGAAUUUUUUGCAUUUUG   2290 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103638669 (LOC103638669), mRNA	NA	coding protein	psRNATarget
EU946902.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*|||||||||||*||||||| targets:587   GUCCGAAUUUUUUAUAUUUUG   607 Target Full Sequence	1.5	Zea mays clone 324770 mRNA sequence	NA	coding protein	psRNATarget
XM_020548398.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   **||||||||||||*|||||| targets:22   CACCGAAUUUUUUGCAUUUUG   42 Target Full Sequence	1.5	PREDICTED: Zea mays 60 kDa jasmonate-induced protein-like (LOC109944019), mRNA	NA	coding protein	psRNATarget
XM_020543088.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   *||||||||||||*||||||* targets:539   AGCCGAAUUUUUUAUAUUUUA   559 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103635740 (LOC103635740), mRNA	NA	coding protein	psRNATarget
XM_008679379.2	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*|||||||||||||*||||* targets:1805   GUCCGAAUUUUUUGUUUUUUU   1825 Target Full Sequence	2.5	PREDICTED: Zea mays putative homeobox DNA-binding and leucine zipper domain family protein isoform 1 (pco078109), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008668778.2	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*||||*|||||||||||||* targets:1448   GUCCGAUUUUUUUGUAUUUUU   1468 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100191204 (pco138005), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU974588.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*|||||||||||*||||||* targets:1369   GCCCGAAUUUUUUAUAUUUUA   1389 Target Full Sequence	2.5	Zea mays clone 453605 beta-1,3-galactosyltransferase 6 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158795.1	ncRNA:21   CCGGCUUAAAAAACAUAAAAC   1   |*|||||||||||*||||||* targets:1369   GCCCGAAUUUUUUAUAUUUUA   1389 Target Full Sequence	2.5	Zea mays beta-1,3-galactosyltransferase 6 (LOC100285906), mRNA	NA	coding protein	psRNATarget