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BaseInfo

ncRNA ID novel_zma_miR10793
Species Zea mays
Class miRNA
Genome position Chr4:204016246-204016307 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 39 - UUUAGGACUUGGAGAGGAUUUGAU - 62
Stem-loop(if miRNA) --    CA     U      A     UGG  G
  CAAA  CUCUC CAAGUC CUAGG   UU G
  ||||  ||||| |||||| |||||   || A
  GUUU  GAGAG GUUCAG GAUUU   AG G
UA    AG     -      -     -UA  U
Stem-loop sequence CAAACACUCUCUCAAGUCACUAGGUGGUUGGAGUGAAUUUUAGGACUUGGAGAGGAUUUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT088050.1
ncRNA:24   UAGUUUAGGAGAGGUUCAGGAUUU   1
  ||||||||||||||||||||*|||
targets:1481   AUCAAAUCCUCUCCAAGUCCCAAA   1504

1.5 Zea mays full-length cDNA clone ZM_BFb0379I10 mRNA, complete cds NA coding protein psRNATarget
NM_001196891.1
ncRNA:24   UAGUUUAGGAGAGGUUCAGGAUUU   1
  ||||||||||||||||||||*|||
targets:1481   AUCAAAUCCUCUCCAAGUCCCAAA   1504

1.5 Zea mays uncharacterized LOC100502413 (LOC100502413), mRNA NA coding protein psRNATarget