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BaseInfo

ncRNA ID	novel_zma_miR10792
Species	Zea mays
Class	miRNA
Genome position	Chr4:202690624-202690691 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	48 - AUGAUAUAAUCUGGAUAGAUU - 68
Stem-loop(if miRNA)	--    C                  UG U    G   UCUG CUAGAUUAUAUCAUCCAA  A UUUU U   |||| ||||||||||||||||||  | ||||   AGAU GGUCUAAUAUAGUAGGUU  U AAAA U UU    A                  GU U    C
Stem-loop sequence	UCUGCCUAGAUUAUAUCAUCCAAUGAUUUUUGUUCAAAAUUUGUUGGAUGAUAUAAUCUGGAUAGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167517.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   ||||||||||||||||||*|| targets:17   AAUCUAUCCAGAUUAUAUAAU   37 Target Full Sequence	1.5	Sequence 5181 from Patent EP2559767	NA	coding protein	psRNATarget
HI407056.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   ||||||||||||||||||*|| targets:17   AAUCUAUCCAGAUUAUAUAAU   37 Target Full Sequence	1.5	Sequence 5181 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239186.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   ||||||||||||||||||*|| targets:17   AAUCUAUCCAGAUUAUAUAAU   37 Target Full Sequence	1.5	Sequence 5181 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001175758.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   |||||||=||||||||||*|| targets:2346   AAUCUAUUCAGAUUAUAUAAU   2366 Target Full Sequence	2.5	Zea mays Transducin/WD40 repeat-like superfamily protein (LOC100383087), mRNA	NA	coding protein	psRNATarget
BT066158.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   |||||||=||||||||||*|| targets:2346   AAUCUAUUCAGAUUAUAUAAU   2366 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0040P17 mRNA, complete cds	NA	coding protein	psRNATarget
AY106954.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   |||||||=||||||||||*|| targets:1765   AAUCUAUUCAGAUUAUAUAAU   1785 Target Full Sequence	2.5	Zea mays PCO143990 mRNA sequence	NA	coding protein	psRNATarget
BT016291.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   |||||||=||||||||||*|| targets:629   AAUCUAUUCAGAUUAUAUAAU   649 Target Full Sequence	2.5	Zea mays clone Contig124 mRNA sequence	NA	coding protein	psRNATarget
EU945446.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   |||||=||||||||||||*|| targets:439   AAUCUGUCCAGAUUAUAUAAU   459 Target Full Sequence	2.5	Zea mays clone 273503 mRNA sequence	NA	coding protein	psRNATarget
EU976590.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   |||||*||||||||||||*|| targets:1636   AAUCUCUCCAGAUUAUAUAAU   1656 Target Full Sequence	2.5	Zea mays clone 984325 mRNA sequence	NA	coding protein	psRNATarget
BT069856.2	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   ||||||*|||||||||||*|| targets:635   AAUCUACCCAGAUUAUAUAAU   655 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0305N24 mRNA, complete cds	NA	coding protein	psRNATarget
EZ104714.1	ncRNA:21   UUAGAUAGGUCUAAUAUAGUA   1   ||||||*|||||||||||*|| targets:50   AAUCUAGCCAGAUUAUAUAAU   70 Target Full Sequence	2.5	TSA: Zea mays contig40371, mRNA sequence	NA	coding protein	psRNATarget