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BaseInfo

ncRNA ID novel_zma_miR10789
Species Zea mays
Class miRNA
Genome position Chr4:192498748-192498868 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 23
Mature sequence(if miRNA) 1 - UUUCGAGAAAGCUGUGACGUACU - 23
Stem-loop(if miRNA) --           C  U                                   -     - U
  UUUCGAGAAAG UG GACGUACUAUGUGUAGAAACCUAGGAGAACUACAU UGAAA C A
  ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| | U
  AAAGCUCUUUC AC CUGCAUGAUACACAUCUUUGGAUCCUCUUGAUGUG ACUUU G A
UU           A  U                                   U     A U
Stem-loop sequence UUUCGAGAAAGCUGUGACGUACUAUGUGUAGAAACCUAGGAGAACUACAUUGAAACUAUAUGAUUUCAUGUGUAGUUCUCCUAGGUUUCUACACAUAGUACGUCUCAACUUUCUCGAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163670.1
ncRNA:23   UCAUGCAGUGUCGAAAGAGCUUU   1
  ||||=||||||*|||||||||||
targets:164   AGUAUGUCACAACUUUCUCGAAA   186

2.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget
LQ235339.1
ncRNA:23   UCAUGCAGUGUCGAAAGAGCUUU   1
  ||||=||||||*|||||||||||
targets:164   AGUAUGUCACAACUUUCUCGAAA   186

2.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
HI403209.1
ncRNA:23   UCAUGCAGUGUCGAAAGAGCUUU   1
  ||||=||||||*|||||||||||
targets:164   AGUAUGUCACAACUUUCUCGAAA   186

2.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget