ncRNA ID | novel_zma_miR10782 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:166122387-166122498 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 21 |
Mature sequence(if miRNA) | 92 - UCCAAUUCUAUGUCCACCAAA - 112 |
Stem-loop(if miRNA) |
--    A      A    A    -                         -A     A   UGGU GACAUG AAUU GAGG GAUCCAUGUGGGAGUAAUCCCUUCC  AUUCA A   |||| |||||| |||| |||| |||||||||||||||||||||||||  |||||   ACCA CUGUAU UUAA CUCU UUAGGUACACCCUCAUUAGGGGAGG  UAAGU U AA    C      C    C    A                         GA     U |
Stem-loop sequence | UGGUAGACAUGAAAUUAGAGGGAUCCAUGUGGGAGUAAUCCCUUCCAAUUCAAAUUUGAAUAGGGAGGGGAUUACUCCCACAUGGAUUAUCUCCAAUUCUAUGUCCACCAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020552919.1 |
|
1.5 | PREDICTED: Zea mays negative regulator of systemic acquired resistance SNI1 (LOC103654875), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020552918.1 |
|
1.5 | PREDICTED: Zea mays negative regulator of systemic acquired resistance SNI1 (LOC103654875), transcript variant X2, mRNA | NA | coding protein | psRNATarget |