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BaseInfo

ncRNA ID novel_zma_miR10779
Species Zea mays
Class miRNA
Genome position Chr4:161947929-161947976 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 20
Mature sequence(if miRNA) 29 - UUGGAUGAUGAUUACUGAGA - 48
Stem-loop(if miRNA) -- G  A    G    - UG UAUU
  U AG UGAU GUUA C  A    G
  | || |||| |||| |  |
  A UC AUUA UAGU G  U    A
AG G  -    G    A GU UAGU
Stem-loop sequence UGAGAUGAUGGUUACUGAUAUUGAUGAUUUGGAUGAUGAUUACUGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550241.1
ncRNA:20   AGAGUCAUUAGUAGUAGGUU   1
  *||||*|||*||||||||||
targets:1325   ACUCAAUAACCAUCAUCCAA   1344

2.5 PREDICTED: Zea mays DNA polymerase V family (LOC103650372), transcript variant X1, mRNA NA coding protein psRNATarget