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BaseInfo

ncRNA ID novel_zma_miR10766
Species Zea mays
Class miRNA
Genome position Chr4:82821757-82821860 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - CACUGGAGGGUUCUUUGCCGAGAG - 24
Stem-loop(if miRNA) --   U  AG       -           AGU   CC               AA
  CAC GG  GGUUCUU UGCCGAGAGCC   CCA  AGGCACUCGGCAAAG  A
  ||| ||  ||||||| |||||||||||   |||  |||||||||||||||  C
  GUG UC  UCAGGGA ACGGCUCUCGG   GGU  UCCGUGAGCCGUUUC  C
GG   -  GG       C           ---   CA               CU
Stem-loop sequence CACUGGAGGGUUCUUUGCCGAGAGCCAGUCCACCAGGCACUCGGCAAAGAAACCUCCUUUGCCGAGUGCCUACUGGGGCUCUCGGCACAGGGACUGGCUGUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ067174.1
ncRNA:24   GAGAGCCGUUUCUUGGGAGGUCAC   1
  |*||||||||||||||=|||||||
targets:23   CACUCGGCAAAGAACCUUCCAGUG   46

1.5 TSA: Zea mays contig02808, mRNA sequence NA coding protein psRNATarget