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BaseInfo

ncRNA ID	novel_zma_miR10750
Species	Zea mays
Class	miRNA
Genome position	Chr3:15664904-15665031 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	105 - CGUGACUGCGUCUCUCGCCCGAGG - 128
Stem-loop(if miRNA)	--    -  U   UCU            UG            CC UG CU   U  CC   UCA   U   CGUG AC GCG   CUCGCCCGAGGU  GCCUCGGGCGAG  G  A  GCG CU  UGC   AGG U   |||| || |||   ||||||||||||  ||||||||||||  |  |  ||| ||  |||   |||   GCGC UG UGC   GAGCGGGCUCCG  UGGAGCCCGCUC  U  U  UGC GA  ACG   UCC A CU    C  -   --U            GU            UC GU AG   U  --   --C   G
Stem-loop sequence	CGUGACUGCGUCUCUCGCCCGAGGUUGGCCUCGGGCGAGCCGUGACUGCGUCUCCUGCUCAAGGUUAGCCUCGCAAGUCGUGAUUGUCUCUCGCCCGAGGUUGGCCUCGGGCGAGUCGUGUCCGCGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001348352.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   |||||||||=|||||||||||||| targets:262   CCUCGGGCGGGAGACGCAGUCACG   285 Target Full Sequence	1.0	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
NM_001348352.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   ||||*||||=|||||||||||||| targets:64   CCUCAGGCGGGAGACGCAGUCACG   87 Target Full Sequence	1.0	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
NM_001348352.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   |||||||||=|*|||||||||||| targets:182   CCUCGGGCGGGCGACGCAGUCACG   205 Target Full Sequence	2.5	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
NM_001348352.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   |||||||||=|*|||||||||||| targets:222   CCUCGGGCGGGCGACGCAGUCACG   245 Target Full Sequence	2.5	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
NM_001348352.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   |||-|||||=|||||||||||||| targets:743   CCU-GGGCGGGAGACGCAGUCACG   765 Target Full Sequence	1.0	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
NM_001348352.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   |||||*|||=*||||||||||||| targets:582   CCUCGAGCGGUAGACGCAGUCACG   605 Target Full Sequence	3.0	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
NM_001348352.1	ncRNA:24   GGAGC-CCGCUCUCUGCGUCAGUGC   1   *|||*-||||=|||||||||||||| targets:621   ACUCCAGGCGGGAGACGCAGUCACG   645 Target Full Sequence	3.0	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
NM_001348352.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   ||-|||*||=|||||||||||||| targets:303   CC-CGGACGGGAGACGCAGUCACG   325 Target Full Sequence	2.0	Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA	NA	coding protein	psRNATarget
XM_008661501.2	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   |||||||||=|||||*|||||||| targets:2898   CCUCGGGCGGGAGACACAGUCACG   2921 Target Full Sequence	2.5	PREDICTED: Zea mays protein ALP1-like (LOC103638649), mRNA	NA	coding protein	psRNATarget
BT040053.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   ***=|||||||||||||||*|||| targets:529   GAGUGGGCGAGAGACGCAGACACG   552 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0062E07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153258.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   ***=|||||||||||||||*|||| targets:1352   GAGUGGGCGAGAGACGCAGACACG   1375 Target Full Sequence	1.5	Zea mays hypothetical protein (LOC100280332), mRNA	NA	coding protein	psRNATarget
BT056030.1	ncRNA:24   GGAGCCCGCUCUCUGCGUCAGUGC   1   ***=|||||||||||||||*|||| targets:1352   GAGUGGGCGAGAGACGCAGACACG   1375 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0149K13 mRNA, complete cds	NA	coding protein	psRNATarget