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BaseInfo

ncRNA ID osa-miRf10672-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AACUCGUGGUGAUGUGGACUAAU - NA
Stem-loop(if miRNA) UCC      C                               ACA  UUCACUCAUG
   GAGAUU GUCCGCGUCACCAUGAGUUAAAAUUUAACUC   GA          A
   |||||| |||||||||||||||||||||||||||||||   ||          G
   CUCUAA CAGGUGUAGUGGUGCUCAAUUUUAAAUUGAG   CU          U
AGA      U                               --G  CUUUUAAAAU
Stem-loop sequence UCCGAGAUUCGUCCGCGUCACCAUGAGUUAAAAUUUAACUCACAGAUUCACUCAUGAGUUAAAAUUUUCUCGGAGUUAAAUUUUAACUCGUGGUGAUGUGGACUAAUCUCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT131244.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:351   AUUAGUCCUCAUCACCAGGAGUU   373

2.5 Oryza sativa clone RRlibC01080 mRNA sequence NA coding protein psRNATarget
BT132149.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:188   AUUAGUCCUCAUCACCAGGAGUU   210

2.5 Oryza sativa clone RRlibD00446 mRNA sequence NA coding protein psRNATarget
AK061909.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:1158   AUUAGUCCUCAUCACCAGGAGUU   1180

2.5 Oryza sativa Japonica Group cDNA clone:001-042-A02, full insert sequence NA coding protein psRNATarget
AK066355.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:1534   AUUAGUCCUCAUCACCAGGAGUU   1556

2.5 Oryza sativa Japonica Group cDNA clone:J013067N05, full insert sequence NA coding protein psRNATarget
XM_015788076.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:1566   AUUAGUCCUCAUCACCAGGAGUU   1588

2.5 PREDICTED: Oryza sativa Japonica Group protein WAVE-DAMPENED 2 (LOC4341479), transcript variant X4, mRNA protein WAVE-DAMPENED 2(LOC4341479) coding protein psRNATarget
XM_015788075.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:1569   AUUAGUCCUCAUCACCAGGAGUU   1591

2.5 PREDICTED: Oryza sativa Japonica Group protein WAVE-DAMPENED 2 (LOC4341479), transcript variant X3, mRNA protein WAVE-DAMPENED 2(LOC4341479) coding protein psRNATarget
XM_015788074.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:1572   AUUAGUCCUCAUCACCAGGAGUU   1594

2.5 PREDICTED: Oryza sativa Japonica Group protein WAVE-DAMPENED 2 (LOC4341479), transcript variant X2, mRNA protein WAVE-DAMPENED 2(LOC4341479) coding protein psRNATarget
XM_015788072.1
ncRNA:23   UAAUCAGGUGUAGUGGUGCUCAA   1
  ||||||||*||||||||*|||||
targets:1575   AUUAGUCCUCAUCACCAGGAGUU   1597

2.5 PREDICTED: Oryza sativa Japonica Group protein WAVE-DAMPENED 2 (LOC4341479), transcript variant X1, mRNA protein WAVE-DAMPENED 2(LOC4341479) coding protein psRNATarget