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BaseInfo

ncRNA ID	novel_zma_miR10736
Species	Zea mays
Class	miRNA
Genome position	Chr10:23170567-23170694 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	22
Mature sequence(if miRNA)	107 - UUUUGGACUUCCAAACUGGCCC - 128
Stem-loop(if miRNA)	--             -  UC            A   G                  CC       A   GCUAGUUUGGGAG CC  AAACCUGGAGGG AUU GAGGGGCUAAAAUCCCCU  UUAUUCA U   ||||||||||||| ||  |||||||||||| ||| ||||||||||||||||||  |||||||   CGGUCAAACCUUC GG  UUUGGGCUUCCC UAA UUCCCCGAUUUUAGGGGA  AAUAAGU U CC             A  -U            C   A                  AA       U
Stem-loop sequence	GCUAGUUUGGGAGCCUCAAACCUGGAGGGAAUUGGAGGGGCUAAAAUCCCCUCCUUAUUCAAUUUUGAAUAAAAAGGGGAUUUUAGCCCCUUAAAUCCCCUUCGGGUUUUGGACUUCCAAACUGGCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU956908.1	ncRNA:22   CCCGGUCAAACCUUCAGGUUUU   1   ||||=|||||||||||=||||| targets:979   GGGCUAGUUUGGAAGUUCAAAA   1000 Target Full Sequence	2.5	Zea mays clone 1577150 mRNA sequence	NA	coding protein	psRNATarget
EU956908.1	ncRNA:22   CCCGGUCAAACCUUCAGGUUUU   1   *|||=||||||||||||||||| targets:942   CGGCUAGUUUGGAAGUCCAAAA   963 Target Full Sequence	1.0	Zea mays clone 1577150 mRNA sequence	NA	coding protein	psRNATarget
EZ102707.1	ncRNA:22   CCCGGUCAAACCUUCAGGUUUU   1   ***|==|||||||||||||||* targets:92   AUACUGGUUUGGAAGUCCAAAC   113 Target Full Sequence	3.0	TSA: Zea mays contig38363, mRNA sequence	NA	coding protein	psRNATarget
EU972148.1	ncRNA:22   CCCGGUCAAACCUUCAGGUUUU   1   ***|==|||||||||||||||* targets:1248   AUACUGGUUUGGAAGUCCAAAC   1269 Target Full Sequence	3.0	Zea mays clone 376281 endo-1,4-beta-glucanase Cel1 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158298.1	ncRNA:22   CCCGGUCAAACCUUCAGGUUUU   1   ***|==|||||||||||||||* targets:1248   AUACUGGUUUGGAAGUCCAAAC   1269 Target Full Sequence	3.0	Zea mays endo-1,4-beta-glucanase Cel1 (LOC100285405), mRNA	NA	coding protein	psRNATarget
XM_020546379.1	ncRNA:22   CCCGGUCAAACCUUCAGGUUUU   1   ***||*|||||||||||=|||| targets:2785   UUCCCUGUUUGGAAGUCUAAAA   2806 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103634963 (LOC103634963), mRNA	NA	coding protein	psRNATarget
EU948862.1	ncRNA:22   CCCGGUCAAACCUUCAGGUUUU   1   **|||||*|||||||*|||||| targets:1573   CAGCCAGAUUGGAAGACCAAAA   1594 Target Full Sequence	2.5	Zea mays clone 387934 mRNA sequence	NA	coding protein	psRNATarget