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BaseInfo

ncRNA ID novel_zma_miR10733
Species Zea mays
Class miRNA
Genome position Chr3:72618001-72618063 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 40 - AUUUAGUUGAUGGUCUGACUUGGC - 63
Stem-loop(if miRNA) --     G     G     A     CCUUCA
  AUUUA UUGAU GUCUG CUUGG      U
  ||||| ||||| ||||| |||||      C
  UGGGU AGCUG CAGGC GGACC      C
AU     A     G     A     ACCGUC
Stem-loop sequence AUUUAGUUGAUGGUCUGACUUGGCCUUCAUCCCUGCCACCAGGACGGACGGUCGAAUGGGUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ080865.1
ncRNA:24   CGGUUCAGUCUGGUAGUUGAUUUA   1
  |=|||||||*|||||||||*||||
targets:74   GUCAAGUCACACCAUCAACCAAAU   97

2.5 TSA: Zea mays contig16504, mRNA sequence NA coding protein psRNATarget
BT065475.2
ncRNA:24   CGGUUCAGUCUGGUAGUUGAUUUA   1
  ||=||||||*|||||||||*||||
targets:208   GCUAAGUCACACCAUCAACCAAAU   231

2.5 Zea mays full-length cDNA clone ZM_BFb0176A18 mRNA, complete cds NA coding protein psRNATarget