ncRNA ID | novel_zma_miR10727 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:108803252-108803327 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCUGUUGUUGGCCUAGAGUAGUCG - 24 |
Stem-loop(if miRNA) |
--U  U    -     C UG     -     AG   U  A    CU CUCU GGCCA A  GCGGC CCCGG  CCG CC C    || |||| ||||| |  ||||| |||||  ||| ||    GA GAGA CCGGU U  UGUCG GGGCU  GGU GG G GCU  U    U     - GU     U     GG   -  U |
Stem-loop sequence | UCUUCUCUGGCCACAUGGCGGCCCCGGAGCCGUCCACGUGGUGGGGUCGGGUGCUGUUGUUGGCCUAGAGUAGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008645724.2 |
|
2.5 | PREDICTED: Zea mays Pentatricopeptide repeat-containing protein (LOC100381630), transcript variant X1, mRNA | NA | coding protein | psRNATarget |