Search result

BaseInfo

ncRNA ID novel_zma_miR10726
Species Zea mays
Class miRNA
Genome position Chr3:109863184-109863304 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 23
Mature sequence(if miRNA) 99 - UUUCGAGAAAGCUGUGACGUACU - 121
Stem-loop(if miRNA) --           CU U                                   -     - U
  UUUCGAGAAAG  G GACGUACUAUGUGUAGAAACCUAGGAGAACUACAU UGAAA C C
  |||||||||||  | ||||||||||||||||||||||||||||||||||| ||||| | U
  AAAGUUCUUUC  C CUGCAUGAUACACAUCUUUGGAUCCUCUUGAUGUG ACUUU G A
UC           AU U                                   U     A U
Stem-loop sequence UUUCGAGAAAGCUGUGACGUACUAUGUGUAGAAACCUAGGAGAACUACAUUGAAACUCUAUGAUUUCAUGUGUAGUUCUCCUAGGUUUCUACACAUAGUACGUCUCUACUUUCUUGAAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163670.1
ncRNA:23   UCAUGCAGUGUCGAAAGAGCUUU   1
  ||||=||||||*|||||||||||
targets:164   AGUAUGUCACAACUUUCUCGAAA   186

2.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget
LQ235339.1
ncRNA:23   UCAUGCAGUGUCGAAAGAGCUUU   1
  ||||=||||||*|||||||||||
targets:164   AGUAUGUCACAACUUUCUCGAAA   186

2.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
HI403209.1
ncRNA:23   UCAUGCAGUGUCGAAAGAGCUUU   1
  ||||=||||||*|||||||||||
targets:164   AGUAUGUCACAACUUUCUCGAAA   186

2.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget