Search result

BaseInfo

ncRNA ID osa-miRf10669-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CCUGUCCCAAGACCGAGUCU - NA
Stem-loop(if miRNA)       U     C        A           A  A  U       UC  UCU
AUAUUC UAGGC UGGUCUUG GGCAGGAACUG GU GU GGUGAAC  GC   A
|||||| ||||| |||||||| ||||||||||| || || |||||||  ||
UAUAAG GUCUG GCCAGAAC CUGUCCUUGGC CA CG UCACUUG  UG   U
      U     A        C           G  G  C       CU  UUG
Stem-loop sequence AUAUUCUUAGGCCUGGUCUUGAGGCAGGAACUGAGUAGUUGGUGAACUCGCUCUAUGUUGUUCGUUCACUCGCGACGCGGUUCCUGUCCCAAGACCGAGUCUGUGAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK242884.1
ncRNA:20   UCUGAGCCAGAACCCUGUCC   1
  =||||||*||||||||||||
targets:402   GGACUCGCUCUUGGGACAGG   421

1.5 Oryza sativa Japonica Group cDNA, clone: J090079F16, full insert sequence NA coding protein psRNATarget
XM_015772447.1
ncRNA:20   UCUGAGCCAGAACCCUGUCC   1
  =||||||*||||||||||||
targets:392   GGACUCGCUCUUGGGACAGG   411

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4334043 (LOC4334043), mRNA uncharacterized LOC4334043(LOC4334043) coding protein psRNATarget