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BaseInfo

ncRNA ID	novel_zma_miR10718
Species	Zea mays
Class	miRNA
Genome position	Chr10:85275300-85275392 [-]
Reference genome	RefGen_v4
Source	SRR5100248;SRR5100255
Length	24
Mature sequence(if miRNA)	70 - AAGAAAACCGUCACUAGAAAUUGU - 93
Stem-loop(if miRNA)	--                     UG  --     UGAG      CCU   AAGAAAACCGUCACUAGAAAU  UA  UUUCU    GCGGUU   U   |||||||||||||||||||||  ||  |||||    ||||||   A   UUCUUUUGGCGGUGAUCUUUA  AU  AAAGA    CGCCAA   U AA                     GU  CU     UGCA      AAG
Stem-loop sequence	AAGAAAACCGUCACUAGAAAUUGUAUUUCUUGAGGCGGUUCCUUAUGAAAACCGCACGUAGAAAUCUAUGAUUUCUAGUGGCGGUUUUCUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163445.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||||||||=|||||||||| targets:79   AUGAUUUCUAGUGGCGGUUUUCUU   102 Target Full Sequence	1.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||||||||=|||||||||| targets:79   AUGAUUUCUAGUGGCGGUUUUCUU   102 Target Full Sequence	1.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
HI402984.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||||||||=|||||||||| targets:79   AUGAUUUCUAGUGGCGGUUUUCUU   102 Target Full Sequence	1.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
JB163473.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||||||||=|||||||||| targets:7   AUGAUUUCUAGUGGCGGUUUUCUU   30 Target Full Sequence	1.5	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
HI403012.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||||||||=|||||||||| targets:7   AUGAUUUCUAGUGGCGGUUUUCUU   30 Target Full Sequence	1.5	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||||||||=|||||||||| targets:7   AUGAUUUCUAGUGGCGGUUUUCUU   30 Target Full Sequence	1.5	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget
HI403026.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   *|=||||||||||=|||||||||| targets:7   UCGAUUUCUAGUGGCGGUUUUCUU   30 Target Full Sequence	1.5	Sequence 1151 from Patent EP2074227	NA	coding protein	psRNATarget
JB163487.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   *|=||||||||||=|||||||||| targets:7   UCGAUUUCUAGUGGCGGUUUUCUU   30 Target Full Sequence	1.5	Sequence 1151 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235156.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   *|=||||||||||=|||||||||| targets:7   UCGAUUUCUAGUGGCGGUUUUCUU   30 Target Full Sequence	1.5	Sequence 1151 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||=|||||=|||||||||| targets:79   AUGAUUUUUAGUGGCGGUUUUCUU   102 Target Full Sequence	2.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
JB163447.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||=|||||=|||||||||| targets:79   AUGAUUUUUAGUGGCGGUUUUCUU   102 Target Full Sequence	2.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
HI402986.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||=|||||=|||||||||| targets:79   AUGAUUUUUAGUGGCGGUUUUCUU   102 Target Full Sequence	2.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
HI403054.1	ncRNA:24   UGU-UAAAGAUCACUGCCAAAAGAA   1   |=|-||||||||||=|||||||||| targets:31   AUAGAUUUCUAGUGGCGGUUUUCUU   55 Target Full Sequence	1.5	Sequence 1179 from Patent EP2074227	NA	coding protein	psRNATarget
JB163515.1	ncRNA:24   UGU-UAAAGAUCACUGCCAAAAGAA   1   |=|-||||||||||=|||||||||| targets:31   AUAGAUUUCUAGUGGCGGUUUUCUU   55 Target Full Sequence	1.5	Sequence 1179 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235184.1	ncRNA:24   UGU-UAAAGAUCACUGCCAAAAGAA   1   |=|-||||||||||=|||||||||| targets:31   AUAGAUUUCUAGUGGCGGUUUUCUU   55 Target Full Sequence	1.5	Sequence 1179 from Patent EP2985353	NA	coding protein	psRNATarget
EU943186.1	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   |==||||*|||||=|||||||||| targets:1966   AUGAUUUGUAGUGGCGGUUUUCUU   1989 Target Full Sequence	2.5	Zea mays clone 1582065 mRNA sequence	NA	coding protein	psRNATarget
XM_008646949.2	ncRNA:24   UGUUAAAGAUCACUGCCAAAAGAA   1   ||||**|*||*||||||||||||| targets:483   ACAAACUGUAAUGACGGUUUUCUU   506 Target Full Sequence	3.0	PREDICTED: Zea mays glutamate receptor 3.1-like (LOC103626528), mRNA	NA	coding protein	psRNATarget
AY109131.2	ncRNA:24   UGUUAAAGA-UCACUGCCAAAAGAA   1   *|=**||||-||||||||||||||* targets:329   UCGUCUUCUGAGUGACGGUUUUCUG   353 Target Full Sequence	3.0	Zea mays PCO093490 mRNA sequence	NA	coding protein	psRNATarget