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BaseInfo

ncRNA ID novel_zma_miR10716
Species Zea mays
Class miRNA
Genome position Chr3:132481019-132481085 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 44 - AUGAAAACCGCCUGUAGAAAUGGC - 67
Stem-loop(if miRNA) --AU  A       U         G  -     A
    GA AACCGCC GUAGAAAUG CC UCCAC G
    || ||||||| ||||||||| || ||||| U
    CU UUGGCGG CAUCUUUAC GG AGGUG A
GUAU  C       U         -  C     U
Stem-loop sequence AUGAAAACCGCCUGUAGAAAUGGCCUCCACAGUAUGUGGACGGCAUUUCUACUGGCGGUUCUCUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403085.1
ncRNA:24   CGGUAAAGAUGUCCGCCAAAAGUA   1
  ***||||=||||||||||||||*|
targets:35   UGGAUUUUUACAGGCGGUUUUCUU   58

2.5 Sequence 1210 from Patent EP2074227 NA coding protein psRNATarget
JB163546.1
ncRNA:24   CGGUAAAGAUGUCCGCCAAAAGUA   1
  ***||||=||||||||||||||*|
targets:35   UGGAUUUUUACAGGCGGUUUUCUU   58

2.5 Sequence 1210 from Patent EP2559767 NA coding protein psRNATarget
LQ235215.1
ncRNA:24   CGGUAAAGAUGUCCGCCAAAAGUA   1
  ***||||=||||||||||||||*|
targets:35   UGGAUUUUUACAGGCGGUUUUCUU   58

2.5 Sequence 1210 from Patent EP2985353 NA coding protein psRNATarget