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BaseInfo

ncRNA ID	novel_zma_miR10715
Species	Zea mays
Class	miRNA
Genome position	Chr3:137208927-137208984 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - UUGGUGUAACCGAACAUGCCCUGA - 24
Stem-loop(if miRNA)	--     U                   CC   AGGGC UGUUCGGUUACACCAAUCC  C   ||||| |||||||||||||||||||   UCCCG ACAAGCCAAUGUGGUUAGG  U AG     U                   UC
Stem-loop sequence	AGGGCUUGUUCGGUUACACCAAUCCCCCUCUGGAUUGGUGUAACCGAACAUGCCCUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167257.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   |*|||||||||||||||||||||| targets:9   UAAGGGCAUGUUCGGUUACACCAA   32 Target Full Sequence	0.0	Sequence 4921 from Patent EP2559767	NA	coding protein	psRNATarget
HI406796.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   |*|||||||||||||||||||||| targets:9   UAAGGGCAUGUUCGGUUACACCAA   32 Target Full Sequence	0.0	Sequence 4921 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238926.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   |*|||||||||||||||||||||| targets:9   UAAGGGCAUGUUCGGUUACACCAA   32 Target Full Sequence	0.0	Sequence 4921 from Patent EP2985353	NA	coding protein	psRNATarget
EZ095217.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   |=|||||*|||||||||||||||| targets:33   UUAGGGCUUGUUCGGUUACACCAA   56 Target Full Sequence	1.0	TSA: Zea mays contig30870, mRNA sequence	NA	coding protein	psRNATarget
XM_008656925.2	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   |=|||||*|||||||||||||||| targets:17   UUAGGGCUUGUUCGGUUACACCAA   40 Target Full Sequence	1.0	PREDICTED: Zea mays OSJNBa0059D20.8-like protein (LOC100304325), transcript variant X3, mRNA	NA	coding protein	psRNATarget
NM_001157439.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   |=|||||*||||||||||||=||| targets:441   UUAGGGCUUGUUCGGUUACAUCAA   464 Target Full Sequence	2.5	Zea mays protein transport protein SEC61 gamma subunit (LOC100284544), mRNA	NA	coding protein	psRNATarget
EU968801.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   |=|||||*||||||||||||=||| targets:441   UUAGGGCUUGUUCGGUUACAUCAA   464 Target Full Sequence	2.5	Zea mays clone 324211 protein transport protein SEC61 gamma subunit mRNA, complete cds	NA	coding protein	psRNATarget
XM_020542872.1	ncRNA:24   AGU-CCCGUACAAGCCAAUGUGGUU   1   |==-||||*|||||||||||||||| targets:1263   UUGCGGGCUUGUUCGGUUACACCAA   1287 Target Full Sequence	1.0	PREDICTED: Zea mays LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.3 (LOC103634808), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT041883.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   *=|||||*||||||||||||*||| targets:782   GUAGGGCUUGUUCGGUUACAACAA   805 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073E14 mRNA, complete cds	NA	coding protein	psRNATarget
BT062257.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   *=|||||*||||||||||||*||| targets:1081   GUAGGGCUUGUUCGGUUACAACAA   1104 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0234J14 mRNA, complete cds	NA	coding protein	psRNATarget
EU975659.1	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   *=|||||*||||||||||||*||| targets:2110   GUAGGGCUUGUUCGGUUACAACAA   2133 Target Full Sequence	2.5	Zea mays clone 495563 ankyrin protein kinase-like mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158998.2	ncRNA:24   AGUCCCGUACAAGCCAAUGUGGUU   1   *=|||||*||||||||||||*||| targets:2111   GUAGGGCUUGUUCGGUUACAACAA   2134 Target Full Sequence	2.5	Zea mays Ankyrin protein kinase-like (LOC100279910), mRNA	NA	coding protein	psRNATarget