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BaseInfo

ncRNA ID novel_zma_miR10709
Species Zea mays
Class miRNA
Genome position Chr3:163507216-163507283 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 1 - UCUUUUCCGUCGUUUUACUGA - 21
Stem-loop(if miRNA) -G  AUU                 CCUUUUUUC
  GG   GGCGACGGAGGGGAGGG         C
  ||   |||||||||||||||||         U
  UC   UUGCUGCCUUUUCUUUU         G
AG  AUU                 CUUUUUUUU
Stem-loop sequence GGGAUUGGCGACGGAGGGGAGGGCCUUUUUUCCUGUUUUUUUUCUUUUCUUUUCCGUCGUUUUACUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949819.1
ncRNA:21   AGUCAUUUUGCUGCCUUUUCU   1
  *|||||=*|||||||||||||
targets:1343   CCAGUAGCACGACGGAAAAGA   1363

2.0 Zea mays clone 446916 mRNA sequence NA coding protein psRNATarget
XM_020547189.1
ncRNA:21   AGUCAUUUUGCUGCCUUUUCU   1
  *|||||=*|||||||||||||
targets:1366   CCAGUAGCACGACGGAAAAGA   1386

2.0 PREDICTED: Zea mays serine/threonine-protein kinase-like protein CCR4 (LOC103645009), mRNA NA coding protein psRNATarget
XM_020548407.1
ncRNA:21   AGUCAUUUUGCUGCCUUUUCU   1
  *|||||=*|||||||||||||
targets:2800   CCAGUAGCACGACGGAAAAGA   2820

2.0 PREDICTED: Zea mays serine/threonine-protein kinase-like protein CCR4 (LOC103646958), mRNA NA coding protein psRNATarget