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BaseInfo

ncRNA ID	novel_zma_miR10704
Species	Zea mays
Class	miRNA
Genome position	Chr3:212729723-212729784 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	1 - CCAGAUCGCGGACCGUCCGGC - 21
Stem-loop(if miRNA)	--     C     G C   A    ---   AAC   CGGAC GUCUG C GUC GGCA   GGG   U   ||||| ||||| | ||| ||||   |||   GCCUG CAGGC G UAG CCGU   CCC   C CG     C     - C   A    GUC   GAU
Stem-loop sequence	CGGACCGUCUGGCCGUCAGGCAGGGAACUCUAGCCCCUGUGCCAGAUCGCGGACCGUCCGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ104830.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:44   GCCGGACGGUCCGCGACCUGG   64 Target Full Sequence	1.5	TSA: Zea mays contig40487, mRNA sequence	NA	coding protein	psRNATarget
EZ099059.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:29   GCCGGACGGUCCGCGACCUGG   49 Target Full Sequence	1.5	TSA: Zea mays contig34714, mRNA sequence	NA	coding protein	psRNATarget
BT061906.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:214   GCCGGACGGUCCGCGACCUGG   234 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0196M13 mRNA, complete cds	NA	coding protein	psRNATarget
EU971146.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:350   GCCGGACGGUCCGCGACCUGG   370 Target Full Sequence	1.5	Zea mays clone 358377 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU968855.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:651   GCCGGACGGUCCGCGACCUGG   671 Target Full Sequence	1.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
EU968855.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:722   GCCGGACGGUCCGCGACCUGG   742 Target Full Sequence	1.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
BT034345.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:686   GCCGGACGGUCCGCGACCUGG   706 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0009F02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001310588.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   |||||||||||||||*||||| targets:1420   GCCGGACGGUCCGCGCUCUGG   1440 Target Full Sequence	1.5	Zea mays uncharacterized LOC100272476 (IDP716), mRNA	NA	coding protein	psRNATarget
NM_001310588.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||* targets:1371   GCCGGACGGUCCGCGACCUGA   1391 Target Full Sequence	2.5	Zea mays uncharacterized LOC100272476 (IDP716), mRNA	NA	coding protein	psRNATarget
BT038788.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   |||||||||||||||*||||| targets:1502   GCCGGACGGUCCGCGCUCUGG   1522 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0325P03 mRNA, complete cds	NA	coding protein	psRNATarget
BT038788.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||* targets:1453   GCCGGACGGUCCGCGACCUGA   1473 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0325P03 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020540955.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   ||||||||||||||||*|||| targets:949   GCCGGACGGUCCGCGACCUGG   969 Target Full Sequence	1.5	PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC103632613), transcript variant X5, mRNA	NA	coding protein	psRNATarget
HI409795.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   |||*||||||||||||*|||| targets:41   GCCAGACGGUCCGCGACCUGG   61 Target Full Sequence	2.5	Sequence 7920 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241925.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   |||*||||||||||||*|||| targets:41   GCCAGACGGUCCGCGACCUGG   61 Target Full Sequence	2.5	Sequence 7920 from Patent EP2985353	NA	coding protein	psRNATarget
JB170256.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   |||*||||||||||||*|||| targets:41   GCCAGACGGUCCGCGACCUGG   61 Target Full Sequence	2.5	Sequence 7920 from Patent EP2559767	NA	coding protein	psRNATarget
EZ049111.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   **||||||||||||||*|||| targets:25   UGCGGACGGUCCGCGACCUGG   45 Target Full Sequence	1.5	TSA: Zea mays contig50229, mRNA sequence	NA	coding protein	psRNATarget
EU952231.1	ncRNA:21   CGGCCUGCCAGGCGCUAGACC   1   |||*||||||||||||*|||| targets:450   GCCAGACGGUCCGCGACCUGG   470 Target Full Sequence	2.5	Zea mays clone 1234152 mRNA sequence	NA	coding protein	psRNATarget