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BaseInfo

ncRNA ID novel_zma_miR10682
Species Zea mays
Class miRNA
Genome position Chr3:153097648-153097721 [+]
Reference genome RefGen_v4
Source SRR5100248;SRR5100255
Length 24
Mature sequence(if miRNA) 1 - AGAUUGUAACACCCUGAAUUUGGG - 24
Stem-loop(if miRNA) --   -UU        C        -      AAAAUU
  AGA   GUAACACC UGAAUUUG GGGUAU      U
  |||   |||||||| |||||||| ||||||      C
  UCU   UAUUGUGG ACUUAAAC CUUAUA      U
UC   CCU        -        A      CUCGUU
Stem-loop sequence AGAUUGUAACACCCUGAAUUUGGGGUAUAAAAUUUCUUUGCUCAUAUUCACAAAUUCAGGUGUUAUUCCUCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669578.2
ncRNA:24   GGGUUU-AAGUCCCACAAUGUUAGA   1
  ||=|||-|||||||||||||||||*
targets:2286   CCUAAAAUUCAGGGUGUUACAAUCG   2310

3.0 PREDICTED: Zea mays uncharacterized LOC100279556 (LOC100279556), transcript variant X1, mRNA NA coding protein psRNATarget