ncRNA ID | novel_zma_miR10682 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:153097648-153097721 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248;SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAUUGUAACACCCUGAAUUUGGG - 24 |
Stem-loop(if miRNA) |
--   -UU        C        -      AAAAUU   AGA   GUAACACC UGAAUUUG GGGUAU      U   |||   |||||||| |||||||| ||||||      C   UCU   UAUUGUGG ACUUAAAC CUUAUA      U UC   CCU        -        A      CUCGUU |
Stem-loop sequence | AGAUUGUAACACCCUGAAUUUGGGGUAUAAAAUUUCUUUGCUCAUAUUCACAAAUUCAGGUGUUAUUCCUCUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669578.2 |
|
3.0 | PREDICTED: Zea mays uncharacterized LOC100279556 (LOC100279556), transcript variant X1, mRNA | NA | coding protein | psRNATarget |