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BaseInfo

ncRNA ID novel_zma_miR10681
Species Zea mays
Class miRNA
Genome position Chr3:1538722-1538789 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 45 - GACCCGAUCUGCUCGACUAAUCGU - 68
Stem-loop(if miRNA) --            UA     U  U   AG  CG
  GAUUAGUCGGGC  GUCGG UC GUU  CA  A
  ||||||||||||  ||||| || |||  ||
  CUAAUCAGCUCG  UAGCC AG CGG  GU  C
UG            UC     C  C   AG  AU
Stem-loop sequence GAUUAGUCGGGCUAGUCGGUUCUGUUAGCACGACUAUGGAGGCCGACCCGAUCUGCUCGACUAAUCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538386.1
ncRNA:24   UGCUAAUCAGCUCGUCUAGCCCAG   1
  ||*|||||||||||||||||||*|
targets:1207   ACAAUUAGUCGAGCAGAUCGGGCC   1230

1.5 PREDICTED: Zea mays anaphase-promoting complex subunit 2 (LOC103626410), transcript variant X3, mRNA NA coding protein psRNATarget