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BaseInfo

ncRNA ID novel_zma_miR10679
Species Zea mays
Class miRNA
Genome position Chr7:181806682-181806742 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 38 - CUCCAAGAGCUCUCCAGAAAACGA - 61
Stem-loop(if miRNA) --GAC      GA                 
     UUCUGG  AGCUCUUGGAGAUGCUCU
     ||||||  |||||||||||||||||A
     AAGACC  UCGAGAACCUCUACGAGA
AGCAA      UC                 
Stem-loop sequence GACUUCUGGGAAGCUCUUGGAGAUGCUCUAAGAGCAUCUCCAAGAGCUCUCCAGAAAACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT066766.1
ncRNA:24   AGCAAAAGACCUCUCGAGAACCUC   1
  |||||||*||||||||||||||||
targets:138   UCGUUUUAUGGAGAGCUCUUGGAG   161

1.0 Zea mays full-length cDNA clone ZM_BFb0066D22 mRNA, complete cds NA coding protein psRNATarget
EU970952.1
ncRNA:24   AGCAAAAGACCUCUCGAGAACCUC   1
  |=*||||||*|=||||||||||||
targets:879   UUAUUUUCUAGGGAGCUCUUGGAG   902

2.5 Zea mays clone 354519 mRNA sequence NA coding protein psRNATarget