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BaseInfo

ncRNA ID novel_zma_miR10662
Species Zea mays
Class miRNA
Genome position Chr3:71767704-71767779 [+]
Reference genome RefGen_v4
Source SRR5100248;SRR5105959;SRR5105961
Length 24
Mature sequence(if miRNA) 53 - UAAUUUAUAACCGUCUAAAAAGGA - 76
Stem-loop(if miRNA) - G      A            ------CC      AAAGA
 C UUUUUA GAUGGUUAUAAA        GUCUUA     U
 | |||||| ||||||||||||        ||||||
 G AAAAAU CUGCCAAUAUUU        CAGAAU     A
A G      -            AAUUUUUA      AAAUU
Stem-loop sequence CGUUUUUAAGAUGGUUAUAAACCGUCUUAAAAGAUAUUAAAUAAGACAUUUUUAAUUUAUAACCGUCUAAAAAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT067946.2
ncRNA:24   AGGAAAAAUCUGCCAAUAUUUAAU   1
  *****|||=*||||||||||||||
targets:665   GAAACUUUGAACGGUUAUAAAUUA   688

2.0 Zea mays full-length cDNA clone ZM_BFb0003M08 mRNA, complete cds NA coding protein psRNATarget