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BaseInfo

ncRNA ID novel_zma_miR10658
Species Zea mays
Class miRNA
Genome position Chr3:68364711-68364789 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AGUACCCGGAUAUGUAAUAACUAC - 24
Stem-loop(if miRNA) --    -CC     A         UACUCUUUC       UC
  AGUA   CGGAU UGUAAUAAC         UAUAUUU  U
  ||||   ||||| |||||||||         |||||||
  UCGU   GCCUA AUGUUAUUG         AUGUAAG  U
AU    CUU     -         ---UAUUAC       UA
Stem-loop sequence AGUACCCGGAUAUGUAAUAACUACUCUUUCUAUAUUUUCUUAUGAAUGUACAUUAUGUUAUUGUAAUCCGUUCUGCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ112037.1
ncRNA:24   CAUC---AAUAAUGUAUAGGCCCAUGA   1
  **||---|||||||||||||*||||||
targets:52   AGAGCGAUUAUUACAUAUCCAGGUACU   78

1.5 TSA: Zea mays contig47698, mRNA sequence NA coding protein psRNATarget