ncRNA ID | osa-miRf10662-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - CGAUGGAGUGGCACUGUUCC - NA |
Stem-loop(if miRNA) |
         A   C             A        G  AAAAA  --   GUUAGCCUCAACUACACGUGGGGAAGAAAGAAG GGGAAAUUG AAC GUGCCACUCCGUC CGUUUUUU UC     UC  UCU                                 A ||||||||| ||| ||||||||||||| |||||||| ||     ||  |||                                 G CCUUUUAAC UUG CACGGUGAGGUAG GCAAAAGG AG     UC  GGG                                 A          C   U             C        G  -----  UG   AUCUAUACCCUGGGUGUACAAUCAAGGUAGGAG |
Stem-loop sequence | GGGAAAUUGAAACCGUGCCACUCCGUCACGUUUUUUGUCAAAAAUCUCUGUUAGCCUCAACUACACGUGGGGAAGAAAGAAGAGAGAGGAUGGAACUAACAUGUGGGUCCCAUAUCUAGGGGUCUGAGGGAAAACGCGAUGGAGUGGCACUGUUCCAAUUUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015787049.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271417 (LOC9271417), mRNA | uncharacterized LOC9271417(LOC9271417) | coding protein | psRNATarget | |||||||||
EF576082.1 |
|
2.5 | Oryza sativa (indica cultivar-group) clone 3-2-C10 serine/threonine-protein kinase receptor precursor, mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
AK102758.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033107C10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015791187.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC4343549), transcript variant X1, mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase B120(LOC4343549) | coding protein | psRNATarget |