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BaseInfo

ncRNA ID	novel_zma_miR10623
Species	Zea mays
Class	miRNA
Genome position	Chr7:16334274-16334337 [+]
Reference genome	RefGen_v4
Source	SRR1997865
Length	24
Mature sequence(if miRNA)	1 - GUGAAAAUCGAUUUUGACUGGCGG - 24
Stem-loop(if miRNA)	--               G          UUAU   GUGAAAAUCGAUUUU ACUGGCGGUU    U   ||||||||||||||| ||||||||||   CACUUUUAGCUAAAA UGACCGCCAG    A GU               G          CCGC
Stem-loop sequence	GUGAAAAUCGAUUUUGACUGGCGGUUUUAUUACGCCGACCGCCAGUGAAAAUCGAUUUUCACUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU960305.1	ncRNA:24   GGCGGUCAGUUUUAGCUAAAAGUG   1   ||||||||*||||||||||||||| targets:666   CCGCCAGUGAAAAUCGAUUUUCAC   689 Target Full Sequence	1.0	Zea mays clone 223391 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU960305.1	ncRNA:24   GGCGGUCAGUUUUAGCUAAAAGUG   1   ||||||||*||||||*|||||||| targets:622   CCGCCAGUGAAAAUCAAUUUUCAC   645 Target Full Sequence	2.5	Zea mays clone 223391 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150001.1	ncRNA:24   GGCGGUCAGUUUUAGCUAAAAGUG   1   ||||||||*||||||||||||||| targets:666   CCGCCAGUGAAAAUCGAUUUUCAC   689 Target Full Sequence	1.0	Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA	NA	coding protein	psRNATarget
NM_001150001.1	ncRNA:24   GGCGGUCAGUUUUAGCUAAAAGUG   1   ||||||||*||||||*|||||||| targets:622   CCGCCAGUGAAAAUCAAUUUUCAC   645 Target Full Sequence	2.5	Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA	NA	coding protein	psRNATarget
EU944461.1	ncRNA:24   GGCGGUCAGUUUUAGCUAAAAGUG   1   ||||||||*||||||||||||||| targets:863   CCGCCAGUGAAAAUCGAUUUUCAC   886 Target Full Sequence	1.0	Zea mays clone 219441 mRNA sequence	NA	coding protein	psRNATarget
EU954222.1	ncRNA:24   GGCGGUCAGUUUUAGCUAAAAGUG   1   **||||||*=|||||||||||||| targets:839   GGGCCAGUAGAAAUCGAUUUUCAC   862 Target Full Sequence	2.0	Zea mays clone 1458779 hemolysin-III related family protein mRNA, complete cds	NA	coding protein	psRNATarget