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BaseInfo

ncRNA ID	novel_zma_miR10618
Species	Zea mays
Class	miRNA
Genome position	Chr2:34776539-34776585 [+]
Reference genome	RefGen_v4
Source	SRR5100248;SRR5105959;SRR5105961
Length	24
Mature sequence(if miRNA)	24 - AAAAGCUGGCUGUGGGGAGAAGCU - 47
Stem-loop(if miRNA)	--     UU   AAG    UUU  G   CUUUU  CUA   AGCU   CU A   |||||  |||   ||||   ||   GAAGA  GGU   UCGG   GA A UC     GG   --G    -UC  A
Stem-loop sequence	CUUUUUUCUAAAGAGCUUUUCUGAAAAGCUGGCUGUGGGGAGAAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT019048.1	ncRNA:24   UCGAAGAGGGGUGUCGGUCGAAAA   1   |||||=|||||||||||||||||| targets:126   AGCUUUUCCCCACAGCCAGCUUUU   149 Target Full Sequence	1.0	Zea mays clone Contig569.F mRNA sequence	NA	coding protein	psRNATarget
XM_008667434.2	ncRNA:24   UCGAAGAGGGGUGUCGGUCGAAAA   1   |||||=|||||||||||||||||| targets:2399   AGCUUUUCCCCACAGCCAGCUUUU   2422 Target Full Sequence	1.0	PREDICTED: Zea mays putative nuclease HARBI1 (LOC103644234), mRNA	NA	coding protein	psRNATarget
XM_020545921.1	ncRNA:24   UCGAAGAGGGGUGUCGGUCGAAAA   1   |||||=|||||||||||||||||| targets:2220   AGCUUUUCCCCACAGCCAGCUUUU   2243 Target Full Sequence	1.0	PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC109943094), mRNA	NA	coding protein	psRNATarget
XM_008677133.2	ncRNA:24   UCGAAGAGGGGUGUCGGUCGAAAA   1   ||*||||||||||||||||*|||| targets:2300   AGAUUCUCCCCACAGCCAGAUUUU   2323 Target Full Sequence	1.5	PREDICTED: Zea mays phosphoglucomutase, chloroplastic (LOC103651489), mRNA	NA	coding protein	psRNATarget
XM_008658633.1	ncRNA:22   GAAGAG-GGGUGUCGGUCGAAAA   1   |||=||-|||||||||||||||| targets:1   CUUUUCUCCCACAGCCAGCUUUU   23 Target Full Sequence	3.0	PREDICTED: Zea mays protein CLT1, chloroplastic (LOC103636274), mRNA	NA	coding protein	psRNATarget
BT087362.1	ncRNA:24   UCGAAGAGGGGUGUCGGUCGAAAA   1   ||*||||=|||||||||||*|||| targets:1199   AGAUUCUUCCCACAGCCAGAUUUU   1222 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0054C12 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177007.2	ncRNA:24   UCGAAGAGGGGUGUCGGUCGAAAA   1   ||*||||=|||||||||||*|||| targets:2426   AGAUUCUUCCCACAGCCAGAUUUU   2449 Target Full Sequence	2.5	Zea mays calcium dependent protein kinase4 (IDP2562), mRNA	NA	coding protein	psRNATarget
FJ805744.1	ncRNA:24   UCGAAGAGGGGUGUCGGUCGAAAA   1   ||*||||=|||||||||||*|||| targets:2426   AGAUUCUUCCCACAGCCAGAUUUU   2449 Target Full Sequence	2.5	Zea mays CDPK protein (CK1) mRNA, complete cds	NA	coding protein	psRNATarget