ncRNA ID | novel_zma_miR10615 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:159290213-159290316 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248;SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAUACCGGACUUGUCAAGUGAUU - 24 |
Stem-loop(if miRNA) |
-- UG   CC   -U          U GAUG   A  AUG  UG  UGAU        U  CUU  GCA  UUUGGUAUCU C    CUU UA   UU  CG    GGGUGA   |  |||  |||  |||||||||| |    ||| ||   ||  ||    |||||A   A  GAA  UGU  AGGCCAUAGA G    GAA AU   AA  GU    CUCGCA UU GU   -C   UC          C -AAA   -  GGA  GU  ---U      |
Stem-loop sequence | UUGCUUCCGCAUUUUGGUAUCUUCGAUGCUUAUAAUGUUUGCGUGAUGGGUGAAACGCUCUUGUGAAAGGUAAAGAAAGCAGAUACCGGACUUGUCAAGUGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ108439.1 |
|
1.5 | TSA: Zea mays contig44098, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU944407.1 |
|
1.5 | Zea mays clone 217991 mRNA sequence | NA | coding protein | psRNATarget |