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BaseInfo

ncRNA ID	novel_zma_miR10591
Species	Zea mays
Class	miRNA
Genome position	Chr2:234052029-234052100 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	52 - UUUAAUCCCCUCAAAUCCCCC - 72
Stem-loop(if miRNA)	--      -      U        C   -C       A   GGGAUU GAGGGG AUUAAAUC UCU  CUAUUUA U   |||||| |||||| |||||||| |||  |||||||   CCCUAA CUCCCC UAAUUUAG AGA  GAUAAGU U CC      A      -        -   AC       U
Stem-loop sequence	GGGAUUGAGGGGUAUUAAAUCCUCUCCUAUUUAAUUUUGAAUAGCAAGAGAUUUAAUCCCCUCAAAUCCCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   ||||||||*|||||||||||| targets:3215   GGGGGAUUGGAGGGGAUUAAA   3235 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
BT085111.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *|||||||*|||||||||||| targets:1283   AGGGGAUUGGAGGGGAUUAAA   1303 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0292J13 mRNA, complete cds	NA	coding protein	psRNATarget
EZ093244.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   ||*|||||*|||||||||||| targets:19   GGAGGAUUGGAGGGGAUUAAA   39 Target Full Sequence	2.5	TSA: Zea mays contig28894, mRNA sequence	NA	coding protein	psRNATarget
BT054737.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   ||*|||||*|||||||||||| targets:133   GGAGGAUUGGAGGGGAUUAAA   153 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0011M02 mRNA, complete cds	NA	coding protein	psRNATarget
JB163452.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *||*||||*|||||||||||| targets:25   AGGAGAUUGGAGGGGAUUAAA   45 Target Full Sequence	2.5	Sequence 1116 from Patent EP2559767	NA	coding protein	psRNATarget
HI402991.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *||*||||*|||||||||||| targets:25   AGGAGAUUGGAGGGGAUUAAA   45 Target Full Sequence	2.5	Sequence 1116 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235121.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *||*||||*|||||||||||| targets:25   AGGAGAUUGGAGGGGAUUAAA   45 Target Full Sequence	2.5	Sequence 1116 from Patent EP2985353	NA	coding protein	psRNATarget
BT041883.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *|*|||||*|||||||||||| targets:812   AGCGGAUUGGAGGGGAUUAAA   832 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073E14 mRNA, complete cds	NA	coding protein	psRNATarget
BT062257.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *|*|||||*|||||||||||| targets:1111   AGCGGAUUGGAGGGGAUUAAA   1131 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0234J14 mRNA, complete cds	NA	coding protein	psRNATarget
EU975659.1	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *|*|||||*|||||||||||| targets:2140   AGCGGAUUGGAGGGGAUUAAA   2160 Target Full Sequence	2.5	Zea mays clone 495563 ankyrin protein kinase-like mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158998.2	ncRNA:21   CCCCCUAAACUCCCCUAAUUU   1   *|*|||||*|||||||||||| targets:2141   AGCGGAUUGGAGGGGAUUAAA   2161 Target Full Sequence	2.5	Zea mays Ankyrin protein kinase-like (LOC100279910), mRNA	NA	coding protein	psRNATarget