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BaseInfo

ncRNA ID novel_zma_miR10583
Species Zea mays
Class miRNA
Genome position Chr2:202862688-202862878 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 168 - AAUAACAAGUGAGUUGAUCUAGAU - 191
Stem-loop(if miRNA) --                                                                                    -CGU G  AC
  CUAGAUCAACUCACUUGUUAUUAUUGUUGAGUUGAUUCUUGAUAGCAUCACUAAACAAUGACAUAUCCGUGUACAAGUAUCCCC    U CA  C
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | ||
  GAUCUAGUUGAGUGAACAAUAAUAACAACUCAACUAAGAACUAUCGUAGUGAUUUGUUACUGUAUAGGCACAUGUUCAUAGGGG    A GU  C
UA                                                                                    UUUU G  AU
Stem-loop sequence CUAGAUCAACUCACUUGUUAUUAUUGUUGAGUUGAUUCUUGAUAGCAUCACUAAACAAUGACAUAUCCGUGUACAAGUAUCCCCCGUUGCAACCCUAUGGAUUUUGGGGAUACUUGUACACGGAUAUGUCAUUGUUUAGUGAUGCUAUCAAGAAUCAACUCAACAAUAAUAACAAGUGAGUUGAUCUAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020537929.1
ncRNA:24   UAGAUCUAGUUGAGUGAACAAUAA   1
  |*|||||||||||||||||||||*
targets:1273   ACCUAGAUCAACUCACUUGUUAUG   1296

1.0 PREDICTED: Zea mays clathrin heavy chain 1-like (LOC109939631), mRNA NA coding protein psRNATarget