ncRNA ID | novel_zma_miR10583 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:202862688-202862878 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 168 - AAUAACAAGUGAGUUGAUCUAGAU - 191 |
Stem-loop(if miRNA) |
--                                                                                    -CGU G  AC   CUAGAUCAACUCACUUGUUAUUAUUGUUGAGUUGAUUCUUGAUAGCAUCACUAAACAAUGACAUAUCCGUGUACAAGUAUCCCC    U CA  C   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | ||   GAUCUAGUUGAGUGAACAAUAAUAACAACUCAACUAAGAACUAUCGUAGUGAUUUGUUACUGUAUAGGCACAUGUUCAUAGGGG    A GU  C UA                                                                                    UUUU G  AU |
Stem-loop sequence | CUAGAUCAACUCACUUGUUAUUAUUGUUGAGUUGAUUCUUGAUAGCAUCACUAAACAAUGACAUAUCCGUGUACAAGUAUCCCCCGUUGCAACCCUAUGGAUUUUGGGGAUACUUGUACACGGAUAUGUCAUUGUUUAGUGAUGCUAUCAAGAAUCAACUCAACAAUAAUAACAAGUGAGUUGAUCUAGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020537929.1 |
|
1.0 | PREDICTED: Zea mays clathrin heavy chain 1-like (LOC109939631), mRNA | NA | coding protein | psRNATarget |