ncRNA ID | novel_zma_miR10581 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:192364347-192364534 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248;SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACCCGGAUUGUAGUUGUGUUUAUA - 24 |
Stem-loop(if miRNA) |
--A    -    -     -----  U     ---- AUUUGUAAAUUUCAGUUUCGCCCUAUUCACCCCCCCUCUAGGCGACUAUCAAUUGGUAUCAGAG    CCCG GAUU GUAGU     UG GUUUA    U                                                                C    |||| |||| |||||     || |||||    |    GGGC CUGA CAUCA     AA AGUGG    A                                                                C CGA    A    A     UCCGA  -     CCAG GGUAGAGGAAGAACCGCACUAGAGGGCUGUAGUGAAGCUCGCCAAUCCGAGAUUACUUCUUGGA |
Stem-loop sequence | ACCCGGAUUGUAGUUGUGUUUAUAUUUGUAAAUUUCAGUUUCGCCCUAUUCACCCCCCCUCUAGGCGACUAUCAAUUGGUAUCAGAGCCAGGUUCUUCAUUAGAGCCUAACCGCUCGAAGUGAUGUCGGGAGAUCACGCCAAGAAGGAGAUGGAGACCGGUGAAAAGCCUACUACAAGUCACGGGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU948909.1 |
|
1.5 | Zea mays clone 389567 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ094420.1 |
|
2.5 | TSA: Zea mays contig30072, mRNA sequence | NA | coding protein | psRNATarget |