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BaseInfo

ncRNA ID	osa-miRf10655-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - CCCACGUGUCAGCCUCACUUUC - NA
Stem-loop(if miRNA)	CC                       UC  U   AACAAAAA GCCAC  GGGCCCACGUGUCAGCCUCACUU  CA UCA        U |||||  |||||||||||||||||||||||  || |||        G CGGUG  CCUGGGUGUACAGUCGGAGUGAG  GU GCC        A      -A                       UC  G   CAGGGCGU
Stem-loop sequence	GCCACCCGGGCCCACGUGUCAGCCUCACUUUCCAUUCAAACAAAAAUGAUGCGGGACCCGGUGCUGAGUGAGGCUGACAUGUGGGUCCAGUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779631.1	ncRNA:22   CUU-UCACUCCGACUGUGCACCC   1   ||=-||||||||||||||||||| targets:877   GAGGAGUGAGGCUGACACGUGGG   899 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group trinucleotide repeat-containing gene 18 protein-like (LOC107280680), mRNA	trinucleotide repeat-containing gene 18 protein-like(LOC107280680)	coding protein	psRNATarget
AK070494.1	ncRNA:22   CU-UUCACUCCGACUGUGCACCC   1   ||-||||||||||||||=||||| targets:1236   GAGAAGUGAGGCUGACAUGUGGG   1258 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023048M13, full insert sequence	NA	coding protein	psRNATarget
AK073133.1	ncRNA:22   CUUUCACUCCGACUGUGCACCC   1   *|**||||||||||||=||||| targets:1091   CACUGUGAGGCUGACAUGUGGG   1112 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033023E13, full insert sequence	NA	coding protein	psRNATarget
CT832042.1	ncRNA:22   CUUUCACUCCGACUGUGCACCC   1   *|**||||||||||||=||||| targets:1106   CACUGUGAGGCUGACAUGUGGG   1127 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103E02, full insert sequence	NA	coding protein	psRNATarget
XM_015776789.1	ncRNA:22   CUUUCACUCCGACUGUGCACCC   1   *|**||||||||||||=||||| targets:1151   CACUGUGAGGCUGACAUGUGGG   1172 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor RAP2-12 (LOC4331843), mRNA	ethylene-responsive transcription factor RAP2-12(LOC4331843)	coding protein	psRNATarget
AJ304840.1	ncRNA:22   CUUUCACUCCGACUGUGCACCC   1   *|**||||||||||||=||||| targets:1085   CACUGUGAGGCUGACAUGUGGG   1106 Target Full Sequence	2.5	Oryza sativa mRNA for ethylene responsive protein (ebp-89 gene)	NA	coding protein	psRNATarget
AY323478.1	ncRNA:22   CUUUCACUCCGACUGUGCACCC   1   *|**||||||||||||=||||| targets:1117   CACUGUGAGGCUGACAUGUGGG   1138 Target Full Sequence	2.5	Oryza sativa (japonica cultivar-group) ap2 domain containing protein (cap2) mRNA, complete cds	NA	coding protein	psRNATarget