ncRNA ID | novel_zma_miR10575 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:176852014-176852115 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 21 |
Mature sequence(if miRNA) | 82 - UGCAGCCGGACUAGCACAACU - 102 |
Stem-loop(if miRNA) |
--GG    -  -    A  A    AACA  U   - --AAAA  C  -     AU     GUGC AG CCGG CU GCAC    AG GCG C      AC GA AGUCU  C     |||| || |||| || ||||    || ||| |      || || |||||  G     CACG UC GGCC GA CGUG    UC CGC G      UG CU UCAGA  C UCAA    A  A    -  -    GGAA  -   U AAGACG  C  A     AG |
Stem-loop sequence | GGGUGCAGCCGGACUAGCACAACAAGUGCGCAAAAACCGAAGUCUAUCGCGAAGACUAUCCGUGCAGAAGUCGCCUAAGGGUGCAGCCGGACUAGCACAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008659388.1 |
|
2.5 | PREDICTED: Zea mays pentatricopeptide repeat-containing protein At2g27610 (LOC103637131), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538181.1 |
|
2.5 | PREDICTED: Zea mays pentatricopeptide repeat-containing protein At2g27610 (LOC109939256), mRNA | NA | coding protein | psRNATarget |