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BaseInfo

ncRNA ID novel_zma_miR10571
Species Zea mays
Class miRNA
Genome position Chr2:169208308-169208463 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - AAUAGAGGGAUGUAGCAGCACGGU - 24
Stem-loop(if miRNA) --      -      U  C   AC   CA    A   UU      G AA C    UUU     U  U   A  C   G  G
  AAUAGA GGGAUG AG AGC  GGU  CUAC CCU  AAUAAA G  C ACCA   AAUAA GU GUU AU AGA UU G
  |||||| |||||| || |||  |||  |||| |||  |||||| |  | ||||   ||||| || ||| || ||| ||
  UUGUUU CCCUAU UC UUG  UCG  GGUG GGG  UUAUUU C  G UGGU   UUGUU CG UAA UG UCU AA A
UU      A      -  C   AA   --    -   UU      G GA U    -UC     U  U   G  A   G  C
Stem-loop sequence AAUAGAGGGAUGUAGCAGCACGGUCACUACACCUUUAAUAAAGGAACCACCAUUUAAUAAUGUUGUUAAUCAGAGUUGGACAAGUCUAGUGAAUUGCUUUGUUCUUGGUUGAGCGUUUAUUUUGGGGUGGGCUAAGUUCCUUAUCCCAUUUGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT055903.2
ncRNA:24   UGGCACGACGAUGUAGGGAGAUAA   1
  =|||||||||||||||||||||||
targets:265   GCCGUGCUGCUACAUCCCUCUAUU   288

0.0 Zea mays full-length cDNA clone ZM_BFc0026N08 mRNA, complete cds NA coding protein psRNATarget