ncRNA ID | novel_zma_miR10571 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:169208308-169208463 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAGAGGGAUGUAGCAGCACGGU - 24 |
Stem-loop(if miRNA) |
--      -      U  C   AC   CA    A   UU      G AA C    UUU     U  U   A  C   G  G   AAUAGA GGGAUG AG AGC  GGU  CUAC CCU  AAUAAA G  C ACCA   AAUAA GU GUU AU AGA UU G   |||||| |||||| || |||  |||  |||| |||  |||||| |  | ||||   ||||| || ||| || ||| ||   UUGUUU CCCUAU UC UUG  UCG  GGUG GGG  UUAUUU C  G UGGU   UUGUU CG UAA UG UCU AA A UU      A      -  C   AA   --    -   UU      G GA U    -UC     U  U   G  A   G  C |
Stem-loop sequence | AAUAGAGGGAUGUAGCAGCACGGUCACUACACCUUUAAUAAAGGAACCACCAUUUAAUAAUGUUGUUAAUCAGAGUUGGACAAGUCUAGUGAAUUGCUUUGUUCUUGGUUGAGCGUUUAUUUUGGGGUGGGCUAAGUUCCUUAUCCCAUUUGUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT055903.2 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFc0026N08 mRNA, complete cds | NA | coding protein | psRNATarget |