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BaseInfo

ncRNA ID osa-miRf10654-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UGAGUGAGGCUGACAUGUGGGUCC - NA
Stem-loop(if miRNA)          CC                       UC  U   AACAAAAA
AAAUGCCAC  GGGCCCACGUGUCAGCCUCACUU  CA UCA        U
|||||||||  |||||||||||||||||||||||  || |||        G
UUUACGGUG  CCUGGGUGUACAGUCGGAGUGAG  GU GCC        A
         -A                       UC  G   CAGGGCGU
Stem-loop sequence AAAUGCCACCCGGGCCCACGUGUCAGCCUCACUUUCCAUUCAAACAAAAAUGAUGCGGGACCCGGUGCUGAGUGAGGCUGACAUGUGGGUCCAGUGGCAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288675.1
ncRNA:24   CCUGGGUGUACAGUCGGAGUGAGU   1
  |||||||||||||||||||*|||*
targets:2675   GGACCCACAUGUCAGCCUCUCUCC   2698

2.5 Oryza sativa Japonica Group cDNA, clone: J090059E06, full insert sequence NA coding protein psRNATarget
AK109635.1
ncRNA:24   CCUGGGUGUACAGUCGGAGUGAGU   1
  ||*|||||||||||||||||||=*
targets:599   GGCCCCACAUGUCAGCCUCACUUC   622

2.5 Oryza sativa Japonica Group cDNA clone:002-138-D08, full insert sequence NA coding protein psRNATarget
XM_015758670.1
ncRNA:24   CCUGGGUGUACAGUCGGAGUGAGU   1
  ||*|||||||||||||||||||=*
targets:821   GGCCCCACAUGUCAGCCUCACUUC   844

2.5 PREDICTED: Oryza sativa Japonica Group proline-rich protein 36 (LOC4327209), mRNA proline-rich protein 36(LOC4327209) coding protein psRNATarget
CT828227.1
ncRNA:24   CCU-GGGUGUACAGUCGGAGUGAGU   1
  *||-|||||||||||||||||||==
targets:1909   CGAGCCCACAUGUCAGCCUCACUUG   1933

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN015L21, full insert sequence NA coding protein psRNATarget