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BaseInfo

ncRNA ID	novel_zma_miR10568
Species	Zea mays
Class	miRNA
Genome position	Chr2:163645713-163645781 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	22
Mature sequence(if miRNA)	48 - ACGUGGCAUCGAGCUCGGCGCC - 69
Stem-loop(if miRNA)	--         ACC       C  U  U  A  AG   CGCCGAGCU   UGCCACG UG CG CC CG  C   |||||||||   ||||||| || || || ||   GCGGCUCGA   ACGGUGC GC GC GG GC  U CC         GCU       A  U  -  C  AG
Stem-loop sequence	CGCCGAGCUACCUGCCACGCUGUCGUCCACGAGCUGACGCGGCGUCGACGUGGCAUCGAGCUCGGCGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020541199.1	ncRNA:22   CCGCGGCUCGAGCUACGGUGCA   1   |||||||||||||||*|||||| targets:1244   GGCGCCGAGCUCGAUACCACGU   1265 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541198.1	ncRNA:22   CCGCGGCUCGAGCUACGGUGCA   1   |||||||||||||||*|||||| targets:1242   GGCGCCGAGCUCGAUACCACGU   1263 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC109940862), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655193.2	ncRNA:22   CCGCGGCUCGAGCUACGGUGCA   1   |||||||||||||||*|||||| targets:1301   GGCGCCGAGCUCGAUACCACGU   1322 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655192.2	ncRNA:22   CCGCGGCUCGAGCUACGGUGCA   1   |||||||||||||||*|||||| targets:1301   GGCGCCGAGCUCGAUACCACGU   1322 Target Full Sequence	1.5	PREDICTED: Zea mays protein trichome birefringence-like 10 (LOC103633510), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT063200.1	ncRNA:22   CC-GCGGCUCGAGCUACGGUGCA   1   ||-||||*|||||||*||||||| targets:460   GGACGCCCAGCUCGACGCCACGU   482 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0038D06 mRNA, complete cds	NA	coding protein	psRNATarget
EU970867.1	ncRNA:22   CC-GCGGCUCGAGCUACGGUGCA   1   ||-||||*|||||||*||||||| targets:784   GGACGCCCAGCUCGACGCCACGU   806 Target Full Sequence	2.5	Zea mays clone 352590 hydrolase, hydrolyzing O-glycosyl compounds mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158000.1	ncRNA:22   CC-GCGGCUCGAGCUACGGUGCA   1   ||-||||*|||||||*||||||| targets:784   GGACGCCCAGCUCGACGCCACGU   806 Target Full Sequence	2.5	Zea mays hydrolase, hydrolyzing O-glycosyl compounds (LOC100285105), mRNA	NA	coding protein	psRNATarget
XM_008654967.2	ncRNA:22   CC-GCGGCUCGAGCUACGGUGCA   1   ||-||||*|||||||*||||||| targets:885   GGACGCCCAGCUCGACGCCACGU   907 Target Full Sequence	2.5	PREDICTED: Zea mays glucan endo-1,3-beta-glucosidase 13 (LOC103633264), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020541370.1	ncRNA:22   CC-GCGGCUCGAGCUACGGUGCA   1   ||-||||*|||||||*||||||| targets:885   GGACGCCCAGCUCGACGCCACGU   907 Target Full Sequence	2.5	PREDICTED: Zea mays glucan endo-1,3-beta-glucosidase 13 (LOC103633264), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541371.1	ncRNA:22   CC-GCGGCUCGAGCUACGGUGCA   1   ||-||||*|||||||*||||||| targets:885   GGACGCCCAGCUCGACGCCACGU   907 Target Full Sequence	2.5	PREDICTED: Zea mays glucan endo-1,3-beta-glucosidase 13 (LOC103633264), transcript variant X2, mRNA	NA	coding protein	psRNATarget