Search result

BaseInfo

ncRNA ID novel_zma_miR10561
Species Zea mays
Class miRNA
Genome position Chr2:147266594-147266687 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 71 - GGCUGUCGGACAUAAGCUUAUGUC - 94
Stem-loop(if miRNA) --               A      GCU   -A     CUUG  GA  CC
  CAUAAGCUUAUGUCC ACGGCC   CUG  CAGCC    GA  UA  A
  ||||||||||||||| ||||||   |||  |||||    ||  ||
  GUAUUCGAAUACAGG UGUCGG   GAC  GUCGG    CU  AU  C
CU               C      ---   CC     CAAA  AC  UU
Stem-loop sequence CAUAAGCUUAUGUCCAACGGCCGCUCUGACAGCCCUUGGAGAUACCACUUUACAUCAAACGGCUGCCCAGGGCUGUCGGACAUAAGCUUAUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI405856.1
ncRNA:24   CUGUAUUCGAAUACAGGCUGUCGG   1
  ||*|||||*|||||||||||=|||
targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33

2.5 Sequence 3981 from Patent EP2074227 NA coding protein psRNATarget
LQ237986.1
ncRNA:24   CUGUAUUCGAAUACAGGCUGUCGG   1
  ||*|||||*|||||||||||=|||
targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33

2.5 Sequence 3981 from Patent EP2985353 NA coding protein psRNATarget
JB166317.1
ncRNA:24   CUGUAUUCGAAUACAGGCUGUCGG   1
  ||*|||||*|||||||||||=|||
targets:10   GAGAUAAGGUUAUGUCCGACGGCC   33

2.5 Sequence 3981 from Patent EP2559767 NA coding protein psRNATarget