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BaseInfo

ncRNA ID	osa-miRf10653-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - CUGGACCCACAUGUCAGCCUCA - NA
Stem-loop(if miRNA)	-  A     A             CAGCAC   GUCCCGCAUC CCAAAUGCCACU GG CCCAC UGUCAGCCUCACU      CGG          A |||||||||||| || ||||| |||||||||||||      |||          U GGUUUACGGUGG CC GGGUG ACAGUCGGAGUGA      GGU          U             G  C     C             ----AA   AAGUUUGUUU
Stem-loop sequence	CCAAAUGCCACUGGACCCACAUGUCAGCCUCACUCAGCACCGGGUCCCGCAUCAUUUUUGUUUGAAUGGAAAGUGAGGCUGACACGUGGGCCCGGGUGGCAUUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK106805.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *||||||||||||||||||||* targets:705   AGAGGCUGACAUGUGGGUCCAU   726 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-116-C03, full insert sequence	NA	coding protein	psRNATarget
XM_015784013.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *||||||||||||||||||||* targets:956   AGAGGCUGACAUGUGGGUCCAU   977 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group thyroid receptor-interacting protein 6 (LOC4337954), mRNA	thyroid receptor-interacting protein 6(LOC4337954)	coding protein	psRNATarget
AK060996.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *||**||||||||||||||||* targets:1028   CGAAACUGACAUGUGGGUCCAA   1049 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:006-203-E08, full insert sequence	NA	coding protein	psRNATarget
XM_015773875.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *||||||||||||||||*|||* targets:1841   CGAGGCUGACAUGUGGGGCCAC   1862 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277200 (LOC107277200), transcript variant X2, mRNA	uncharacterized LOC107277200(LOC107277200)	coding protein	psRNATarget
XM_015773874.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *||||||||||||||||*|||* targets:1945   CGAGGCUGACAUGUGGGGCCAC   1966 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277200 (LOC107277200), transcript variant X1, mRNA	uncharacterized LOC107277200(LOC107277200)	coding protein	psRNATarget
XM_015756952.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *||||||||||||||||*|||* targets:87   AGAGGCUGACAUGUGGGCCCAA   108 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group F-box protein At3g22700 (LOC4347377), transcript variant X3, mRNA	F-box protein At3g22700(LOC4347377)	coding protein	psRNATarget
XM_015775230.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|=||||||||||||||*|||* targets:970   GGGGGCUGACAUGUGGGACCAC   991 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X2, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget
AK243575.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|=||||||||||||||*|||* targets:1095   GGGGGCUGACAUGUGGGACCAC   1116 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100082H15, full insert sequence	NA	coding protein	psRNATarget
XM_015775229.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|=||||||||||||||*|||* targets:1135   GGGGGCUGACAUGUGGGACCAC   1156 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X1, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget
XM_015775234.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|=||||||||||||||*|||* targets:1145   GGGGGCUGACAUGUGGGACCAC   1166 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X6, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget
XM_015775231.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|=||||||||||||||*|||* targets:1145   GGGGGCUGACAUGUGGGACCAC   1166 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331473 (LOC4331473), transcript variant X3, mRNA	uncharacterized LOC4331473(LOC4331473)	coding protein	psRNATarget
XM_015784478.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   |**||||||||||||||*|||* targets:699   UAUGGCUGACAUGUGGGCCCAU   720 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281116 (LOC107281116), mRNA	uncharacterized LOC107281116(LOC107281116)	coding protein	psRNATarget
XM_015785206.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   |**||||||||||||||*|||* targets:1331   UUUGGCUGACAUGUGGGCCCAU   1352 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group cyclin-B1-5-like (LOC9268872), transcript variant X2, mRNA	cyclin-B1-5-like(LOC9268872)	coding protein	psRNATarget
JB163962.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|***||||||||||||||||* targets:28   CGUCACUGACAUGUGGGUCCAU   49 Target Full Sequence	3.0	Sequence 1626 from Patent EP2559767	NA	coding protein	psRNATarget
HI403501.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|***||||||||||||||||* targets:28   CGUCACUGACAUGUGGGUCCAU   49 Target Full Sequence	3.0	Sequence 1626 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235631.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   *|***||||||||||||||||* targets:28   CGUCACUGACAUGUGGGUCCAU   49 Target Full Sequence	3.0	Sequence 1626 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015792850.1	ncRNA:22   ACUCCGACUGUACACCCAGGUC   1   ||***||||||||||||||||* targets:897   UGUCACUGACAUGUGGGUCCAU   918 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4344679 (LOC4344679), mRNA	uncharacterized LOC4344679(LOC4344679)	coding protein	psRNATarget