ncRNA ID | novel_zma_miR10559 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:145876288-145876393 [+] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 83 - GUUGAUGUAGUAUGACUUAGGGGU - 106 |
Stem-loop(if miRNA) |
--    -U      G  U -         CUAC       UG -UC     AA   U   CUCU  GUUAUA CU C UUAGCUCGG    GUGUAAU  G   CAUCA  GAC U   ||||  |||||| || | |||||||||    |||||||  |   |||||  |||   GGGA  CAGUAU GA G AGUUGAGUU    CAUGUUG  U   GUAGU  UUG G UG    UU      -  U U         ----       GU GUA     GG   G |
Stem-loop sequence | CUCUUGUUAUAGCUUCUUAGCUCGGCUACGUGUAAUUGGUCCAUCAAAGACUUGGGUUGGUGAUGAUGUUGGUUGUACUUGAGUUGAUGUAGUAUGACUUAGGGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT017298.1 |
|
2.5 | Zea mays clone EL01N0315H09.c mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008645964.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC100501171 (LOC100501171), transcript variant X1, mRNA | NA | coding protein | psRNATarget |