ncRNA ID | osa-miRf10652-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CGUCACGGAUGAGUCAUCUGU - NA |
Stem-loop(if miRNA) |
      ---U    -                    A       AAAAAA     C                     ACAU  UA  U  GC AUUAGU    GGUC GUCACGGAUGAGUCAUCUGU ACGGGCC      UUGCC GAUUGAGAUAUGGUCGCAUAG    GU  GA GU  A ||||||    |||| |||||||||||||||||||| |||||||      ||||| |||||||||||||||||||||    ||  || ||  U UAAUCA    UCAG UAGUGCCUACUCAGUAGGCA UGCCCGG      AAUGG CUAACUCUAUACCAGUGUGUC    CG  CU CA  A       UAUC    G                    C       AUAAAC     -                     ----  GA  -  AA |
Stem-loop sequence | AUUAGUUGGUCGUCACGGAUGAGUCAUCUGUAACGGGCCAAAAAAUUGCCCGAUUGAGAUAUGGUCGCAUAGACAUGUUAGAUGUGCAUAAAACUCAGGCCUGUGUGACCAUAUCUCAAUCGGUAACAAAUAGGCCCGUCACGGAUGACUCAUCCGUGAUGGACUCUAUACUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK068923.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015761270.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA | uncharacterized LOC9270068(LOC9270068) | coding protein | psRNATarget | |||||||||
AK119390.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK121156.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023079A20, full insert sequence | NA | coding protein | psRNATarget |