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BaseInfo

ncRNA ID osa-miRf10652-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CGUCACGGAUGAGUCAUCUGU - NA
Stem-loop(if miRNA)       ---U    -                    A       AAAAAA     C                     ACAU  UA  U  GC
AUUAGU    GGUC GUCACGGAUGAGUCAUCUGU ACGGGCC      UUGCC GAUUGAGAUAUGGUCGCAUAG    GU  GA GU  A
||||||    |||| |||||||||||||||||||| |||||||      ||||| |||||||||||||||||||||    ||  || ||  U
UAAUCA    UCAG UAGUGCCUACUCAGUAGGCA UGCCCGG      AAUGG CUAACUCUAUACCAGUGUGUC    CG  CU CA  A
      UAUC    G                    C       AUAAAC     -                     ----  GA  -  AA
Stem-loop sequence AUUAGUUGGUCGUCACGGAUGAGUCAUCUGUAACGGGCCAAAAAAUUGCCCGAUUGAGAUAUGGUCGCAUAGACAUGUUAGAUGUGCAUAAAACUCAGGCCUGUGUGACCAUAUCUCAAUCGGUAACAAAUAGGCCCGUCACGGAUGACUCAUCCGUGAUGGACUCUAUACUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK068923.1
ncRNA:21   UGUCUACUGAGUAGGCACUGC   1
  ||||||||||||||*||||||
targets:1229   ACAGAUGACUCAUCAGUGACG   1249

1.5 Oryza sativa Japonica Group cDNA clone:J013170A09, full insert sequence NA coding protein psRNATarget
XM_015761270.1
ncRNA:21   UGUCUACUGAGUAGGCACUGC   1
  ||*|||||||||||=||||||
targets:12   ACUGAUGACUCAUCUGUGACG   32

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA uncharacterized LOC9270068(LOC9270068) coding protein psRNATarget
AK119390.1
ncRNA:21   UGUCUACUGAGUAGGCACUGC   1
  **||||||||||||*||||||
targets:3073   UGAGAUGACUCAUCAGUGACG   3093

1.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK121156.1
ncRNA:21   UGUCUACUGAGUAGGCACUGC   1
  **|||||**||||||||||||
targets:1079   UGAGAUGUGUCAUCCGUGACG   1099

2.5 Oryza sativa Japonica Group cDNA clone:J023079A20, full insert sequence NA coding protein psRNATarget