ncRNA ID | osa-miRf10651-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - AAGUUGGUGCCCGUCACAGAUGA - NA |
Stem-loop(if miRNA) |
       G                C       AAGUUUG G     -- G   GU   AGAAACAGGGGAUUAGUAUAUAGCCCGUCACUUAUGAGUCAUCUGUGACGGACCUCAAGUUGGUGCAUG GGAUGAU GUCAUCUGUGAUGGGC CCAACUU       A AUAUU  U UAA  UUG                                                                     U ||||||| |||||||||||||||| |||||||       | |||||  | |||  |||                                                                     C UCUACUG UAGUAGACACUGCCCG GGUUGAA       C GGGCU  U UGU  AUU                                                                     A        G                U       ----AUC -     AA -   --   GUAAGGUAUAGAGUUUGAAUGUGUAUAGAGUUUGAAUUCAACCCCGGGUAGUGUCUACUGGUAGUAAGU |
Stem-loop sequence | GGAUGAUGGUCAUCUGUGAUGGGCCCCAACUUAAGUUUGAGAUAUUUGUAAGUUUGAGAAACAGGGGAUUAGUAUAUAGCCCGUCACUUAUGAGUCAUCUGUGACGGACCUCAAGUUGGUGCAUGUCAUGAAUGAUGGUCAUCUGUGAUGGGCCCCAACUUAAGUUUGAGAUAUGUGUAAGUUUGAGAUAUGGAAUGUUAUGUUAAUCGGGCCUAAAGUUGGUGCCCGUCACAGAUGAUGGUCAUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK119390.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK107543.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015768179.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277277 (LOC107277277), mRNA | uncharacterized LOC107277277(LOC107277277) | coding protein | psRNATarget |