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BaseInfo

ncRNA ID osa-miRf10651-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AAGUUGGUGCCCGUCACAGAUGA - NA
Stem-loop(if miRNA)        G                C       AAGUUUG G     -- G   GU   AGAAACAGGGGAUUAGUAUAUAGCCCGUCACUUAUGAGUCAUCUGUGACGGACCUCAAGUUGGUGCAUG
GGAUGAU GUCAUCUGUGAUGGGC CCAACUU       A AUAUU  U UAA  UUG                                                                     U
||||||| |||||||||||||||| |||||||       | |||||  | |||  |||                                                                     C
UCUACUG UAGUAGACACUGCCCG GGUUGAA       C GGGCU  U UGU  AUU                                                                     A
       G                U       ----AUC -     AA -   --   GUAAGGUAUAGAGUUUGAAUGUGUAUAGAGUUUGAAUUCAACCCCGGGUAGUGUCUACUGGUAGUAAGU
Stem-loop sequence GGAUGAUGGUCAUCUGUGAUGGGCCCCAACUUAAGUUUGAGAUAUUUGUAAGUUUGAGAAACAGGGGAUUAGUAUAUAGCCCGUCACUUAUGAGUCAUCUGUGACGGACCUCAAGUUGGUGCAUGUCAUGAAUGAUGGUCAUCUGUGAUGGGCCCCAACUUAAGUUUGAGAUAUGUGUAAGUUUGAGAUAUGGAAUGUUAUGUUAAUCGGGCCUAAAGUUGGUGCCCGUCACAGAUGAUGGUCAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK119390.1
ncRNA:23   AGUAGACACUGCCCGUGGUUGAA   1
  *|||||||||||||||||||=||
targets:3040   CCAUCUGUGACGGGCACCAAUUU   3062

1.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK107543.1
ncRNA:23   AGUAGACACUGCCCGUGGUUGAA   1
  |||||||||||||||*|||||||
targets:1632   UCAUCUGUGACGGGCCCCAACUU   1654

1.5 Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence NA coding protein psRNATarget
XM_015768179.1
ncRNA:23   AGUAGACACUGCCCGUGGUUGAA   1
  |**|||||||||||||=|||||*
targets:431   UACUCUGUGACGGGCAUCAACUA   453

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277277 (LOC107277277), mRNA uncharacterized LOC107277277(LOC107277277) coding protein psRNATarget