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BaseInfo

ncRNA ID novel_zma_miR10520
Species Zea mays
Class miRNA
Genome position Chr1:42394137-42394216 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 57 - AGAGUCGCUCUGCUCUGGGGCACC - 80
Stem-loop(if miRNA) --    U         C   GG      AC          G
  AGAG CGCUCUGCU UGG  CACCGG  ACUGUCCGGU U
  |||| ||||||||| |||  ||||||  ||||||||||
  UCUC GCGAGGCGA AUU  GUGGCU  UGACAGGCCA A
GG    C         U   AA      --          C
Stem-loop sequence AGAGUCGCUCUGCUCUGGGGCACCGGACACUGUCCGGUGUACACCGGACAGUUCGGUGAAUUAUAGCGGAGCGCCUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI410010.1
ncRNA:24   CCACGGGGUCUCGUCUCGCUGAGA   1
  ||||||||||=|*|||||||||||
targets:42   GGUGCCCCAGGGAAGAGCGACUCU   65

2.5 Sequence 8135 from Patent EP2074227 NA coding protein psRNATarget
JB170471.1
ncRNA:24   CCACGGGGUCUCGUCUCGCUGAGA   1
  ||||||||||=|*|||||||||||
targets:42   GGUGCCCCAGGGAAGAGCGACUCU   65

2.5 Sequence 8135 from Patent EP2559767 NA coding protein psRNATarget
LQ242140.1
ncRNA:24   CCACGGGGUCUCGUCUCGCUGAGA   1
  ||||||||||=|*|||||||||||
targets:42   GGUGCCCCAGGGAAGAGCGACUCU   65

2.5 Sequence 8135 from Patent EP2985353 NA coding protein psRNATarget