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BaseInfo

ncRNA ID	novel_zma_miR10516
Species	Zea mays
Class	miRNA
Genome position	Chr1:61844360-61844416 [-]
Reference genome	RefGen_v4
Source	SRR5100248;SRR5100255
Length	23
Mature sequence(if miRNA)	1 - CGUGAAUUACUGAUCCUGGCACC - 23
Stem-loop(if miRNA)	--     U   G   C         AUC   UGCUA GAU AGU AUUUAUGUA   G   ||||| ||| ||| |||||||||   U   ACGGU CUA UCA UAAGUGCAU   U CC     C   G   U         GUG
Stem-loop sequence	UGCUAUGAUGAGUCAUUUAUGUAAUCGUUGUGUACGUGAAUUACUGAUCCUGGCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ050603.1	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   *|||||||||||||*|||||||| targets:11   CGUGCCAGGAUCAGCAAUUCACG   33 Target Full Sequence	1.5	TSA: Zea mays contig51723, mRNA sequence	NA	coding protein	psRNATarget
XM_020550893.1	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   *||||||||||||||*||||||| targets:514   CGUGCCAGGAUCAGUUAUUCACG   536 Target Full Sequence	1.5	PREDICTED: Zea mays diacylglycerol O-acyltransferase 2D-like (LOC103650530), mRNA	NA	coding protein	psRNATarget
NM_001159083.2	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   *||||||||||||||*||||||| targets:1044   CGUGCCAGGAUCAGUUAUUCACG   1066 Target Full Sequence	1.5	Zea mays oxidoreductase (LOC100286195), mRNA	NA	coding protein	psRNATarget
EU976070.1	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   *||||||||||||||*||||||| targets:1045   CGUGCCAGGAUCAGUUAUUCACG   1067 Target Full Sequence	1.5	Zea mays clone 510496 oxidoreductase mRNA, complete cds	NA	coding protein	psRNATarget
EU975850.1	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   *||||||||||||||*||||||| targets:1235   CGUGCCAGGAUCAGUUAUUCACG   1257 Target Full Sequence	1.5	Zea mays clone 503046 mRNA sequence	NA	coding protein	psRNATarget
EU940916.1	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   *||||||||||||||*||||||| targets:366   CGUGCCAGGAUCAGUUAUUCACG   388 Target Full Sequence	1.5	Zea mays clone 1212834 mRNA sequence	NA	coding protein	psRNATarget
EU940954.1	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   *||||||||||||||*||||||| targets:1322   CGUGCCAGGAUCAGUUAUUCACG   1344 Target Full Sequence	1.5	Zea mays clone 1220838 mRNA sequence	NA	coding protein	psRNATarget
BT061892.2	ncRNA:23   CCACGGUCCUAGUCAUUAAGUGC   1   **|||*|||*||||||||||||* targets:42   AAUGCAAGGUUCAGUAAUUCACA   64 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0194O04 mRNA, complete cds	NA	coding protein	psRNATarget