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BaseInfo

ncRNA ID novel_zma_miR10511
Species Zea mays
Class miRNA
Genome position Chr1:72499517-72499586 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 1 - UGACAUGACUGAUGAUAAGUGACA - 24
Stem-loop(if miRNA) ---UU    CCCA      UG -   AA   -   UG
     CUUA    GUCGGU  U UCA  AGG CGU  C
     ||||    ||||||  | |||  ||| |||  A
     GAAU    UAGUCA  A AGU  UCC GCA  A
ACAGU    --AG      GU C   CG   A   CA
Stem-loop sequence UUCUUACCCAGUCGGUUGUUCAAAAGGCGUUGCAAACACGACCUGCUGACAUGACUGAUGAUAAGUGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406438.1
ncRNA:24   ACAGUGAAUAGUAGUCAGUACAGU   1
  ||*|||||||||||||||||||||
targets:209   UGCCACUUAUCAUCAGUCAUGUCA   232

0.0 Sequence 4563 from Patent EP2074227 NA coding protein psRNATarget
LQ238568.1
ncRNA:24   ACAGUGAAUAGUAGUCAGUACAGU   1
  ||*|||||||||||||||||||||
targets:209   UGCCACUUAUCAUCAGUCAUGUCA   232

0.0 Sequence 4563 from Patent EP2985353 NA coding protein psRNATarget
JB166899.1
ncRNA:24   ACAGUGAAUAGUAGUCAGUACAGU   1
  ||*|||||||||||||||||||||
targets:209   UGCCACUUAUCAUCAGUCAUGUCA   232

0.0 Sequence 4563 from Patent EP2559767 NA coding protein psRNATarget
BT054943.1
ncRNA:24   ACAGUGAAUAGUAGUCAGUACAGU   1
  **||=|||||*||||*||||||||
targets:920   AUUCGCUUAUAAUCACUCAUGUCA   943

2.5 Zea mays full-length cDNA clone ZM_BFc0087N18 mRNA, complete cds NA coding protein psRNATarget