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BaseInfo

ncRNA ID	novel_zma_miR10510
Species	Zea mays
Class	miRNA
Genome position	Chr1:72791478-72791603 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	103 - UAUUUUCGUCGGCCUCGAGACCGA - 126
Stem-loop(if miRNA)	--U               G  A             UUUCU                 C   CGA    AUUUUCGUCGGCCUC AG CCGACGAAAAUAA     GUAUUUUCGUGGGCCUG CGA   A    ||||||||||||||| || |||||||||||||     ||||||||||||||||| |||    UAAAAGCAGCCGGGG UC GGCUGCUUUUAUU     CAUAAAAGCACCCGGGC GUU   A CAU               A  C             --CCU                 A   AUA
Stem-loop sequence	UAUUUUCGUCGGCCUCGAGACCGACGAAAAUAAUUUCUGUAUUUUCGUGGGCCUGCCGACGAAAAUAUUGACGGGCCCACGAAAAUACUCCUUAUUUUCGUCGGCCUAGGGGCCGACGAAAAUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020545471.1	ncRNA:24   AGCCAGAG---CUCCGGCUGCUUUUAU   1   ||||*|||---|||||||||||||||| targets:487   UCGGCCUCAGUGAGGCCGACGAAAAUA   513 Target Full Sequence	3.0	PREDICTED: Zea mays spidroin-1-like (LOC109942901), mRNA	NA	coding protein	psRNATarget
XM_008673086.1	ncRNA:24   AGCCAGAG---CUCCGGCUGCUUUUAU   1   ||||*|||---|||||||||||||||| targets:541   UCGGCCUCACUGAGGCCGACGAAAAUA   567 Target Full Sequence	3.0	PREDICTED: Zea mays collagen alpha-1(I) chain-like (LOC103648656), mRNA	NA	coding protein	psRNATarget
XM_020542953.1	ncRNA:24   AGCCAGA-GCUCCGGCUGCUUUUAU   1   *|||*||-=|||||||||||||||| targets:436   GCGGCCUGUGAGGCCGACGAAAAUA   460 Target Full Sequence	3.0	PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC109941745), mRNA	NA	coding protein	psRNATarget
BT042581.1	ncRNA:24   AGCC-------AGAGC-UCCGGCUGCUUUUAU   1   *|||-------|=|||-||||||||||||||| targets:473   ACGGAAAUUAUUUUCGUAGGCCGACGAAAAUA   504 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0345H15 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020537983.1	ncRNA:22   CCAGAGCUCCGGCUGCUUUUAU   1   ***|*||||||||||||||||| targets:1   AUGCCCGAGGCCGACGAAAAUA   22 Target Full Sequence	1.0	PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC109939678), mRNA	NA	coding protein	psRNATarget
XM_020541648.1	ncRNA:24   AGCCAGAG-CUCCGGCUGCUUUUAU   1   ||*|*|*|-|||||||||||||||| targets:43   UCAGCCACUGAGGCCGACGAAAAUA   67 Target Full Sequence	3.0	PREDICTED: Zea mays extensin-like (LOC103634127), mRNA	NA	coding protein	psRNATarget
XM_020542100.1	ncRNA:24   AGCCAGA-GCUCCGGCUGCUUUUAU   1   *****||-=|||||||||||||||| targets:79   CGCCACUAUGAGGCCGACGAAAAUA   103 Target Full Sequence	3.0	PREDICTED: Zea mays basic proline-rich protein-like (LOC109941361), mRNA	NA	coding protein	psRNATarget