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BaseInfo

ncRNA ID	osa-miRf10648-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - GGUUUUGGUCUACGUGGUGUACACG - NA
Stem-loop(if miRNA)	G            C            C  AGAGAAUAGAGAGAGAGAGAAAGAA   UAUGACAUGCGGGUCCCAUAAUU AAUCCACGG GGUUUUGGUCUA GUGGUGUACACG GG                         GUG                       U ||||||||| |||||||||||| |||||||||||| ||                         |||                       U UUAGGUGCC CCAAAACCAGAU CACCGUAUGUGC CC                         UCA                       U          A            A            A  ------------------------G   GGUUAGUCGCAAAAAAAAUUAAU
Stem-loop sequence	AAUCCACGGGGGUUUUGGUCUACGUGGUGUACACGCGGAGAGAAUAGAGAGAGAGAGAAAGAAGUGUAUGACAUGCGGGUCCCAUAAUUUUUUAAUUAAAAAAAACGCUGAUUGGACUGCCACGUGUAUGCCACAUAGACCAAAACCACCGUGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015787187.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   ||||||||||||||||||||||||| targets:1055   CGUGUACACCACGUAGACCAAAACC   1079 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281343 (LOC107281343), mRNA	uncharacterized LOC107281343(LOC107281343)	coding protein	psRNATarget
AK120550.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |||||||=||||||||||=|||||| targets:1148   CGUGUACGCCACGUAGACUAAAACC   1172 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013130B09, full insert sequence	NA	coding protein	psRNATarget
AK120031.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   ||*||||=|=||||||||||||||| targets:2266   CGCGUACGCUACGUAGACCAAAACC   2290 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-186-D08, full insert sequence	NA	coding protein	psRNATarget
XM_015755484.1	ncRNA:25   GCACAUG-UGGUGCAUCUGGUUUUGG   1   **||*||-=||||||||||||||||| targets:10   ACUGGACUGCCACGUAGACCAAAACC   35 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group protein SAR DEFICIENT 1 (LOC4346682), transcript variant X3, mRNA	protein SAR DEFICIENT 1(LOC4346682)	coding protein	psRNATarget
XM_015762680.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |*****|=||||||||||||||||| targets:1724   CUCAGCCGCCACGUAGACCAAAACC   1748 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group endoglucanase 18-like (LOC4352105), mRNA	endoglucanase 18-like(LOC4352105)	coding protein	psRNATarget
XM_015774711.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |*****|=||||||||||||||||| targets:1484   CUCAGCCGCCACGUAGACCAAAACC   1508 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group patatin-like protein 3 (LOC4333116), mRNA	patatin-like protein 3(LOC4333116)	coding protein	psRNATarget
XM_015761178.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |*****|=||||||||||||||||| targets:1328   CUCAGCCGCCACGUAGACCAAAACC   1352 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276677 (LOC107276677), transcript variant X1, mRNA	uncharacterized LOC107276677(LOC107276677)	coding protein	psRNATarget
XM_015791719.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |*****|=|||||||||=||||||| targets:1241   CUCAGCCGCCACGUAGAUCAAAACC   1265 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable glucuronosyltransferase Os05g0123100 (LOC4343767), transcript variant X7, mRNA	probable glucuronosyltransferase Os05g0123100(LOC4343767)	coding protein	psRNATarget
XM_015779781.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |*****|=||||||||||=|||||| targets:1104   CUCAGCCGCCACGUAGACUAAAACC   1128 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278778 (LOC107278778), mRNA	uncharacterized LOC107278778(LOC107278778)	coding protein	psRNATarget
XM_015768894.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |*****|=|||||||||=||||||| targets:730   CUCAGCCGCCACGUAGAUCAAAACC   754 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group shootin-1-like (LOC107276267), mRNA	shootin-1-like(LOC107276267)	coding protein	psRNATarget
XM_015788686.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   ||**|=|*|||||||||||||||*| targets:987   CGCAUGCUCCACGUAGACCAAAAGC   1011 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X2, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
XM_015788685.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   ||**|=|*|||||||||||||||*| targets:869   CGCAUGCUCCACGUAGACCAAAAGC   893 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable inactive purple acid phosphatase 28 (LOC4341954), transcript variant X1, mRNA	probable inactive purple acid phosphatase 28(LOC4341954)	coding protein	psRNATarget
AK108540.1	ncRNA:25   GCACAUGUGGUGCAUCUGGUUUUGG   1   |*****|||||||||||*||||||| targets:1444   CUCAGCCACCACGUAGAACAAAACC   1468 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-144-D01, full insert sequence	NA	coding protein	psRNATarget