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BaseInfo

ncRNA ID	novel_zma_miR10498
Species	Zea mays
Class	miRNA
Genome position	Chr1:98087829-98087925 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	1 - AAUCCCCUCUAUUACCCUUUG - 21
Stem-loop(if miRNA)	---AAGC        U                    UUG     C   A        UAAUGGAG GGAUUGAGGGGGCUAUAAUC   UACUA UUA U        |||||||| ||||||||||||||||||||   ||||| |||        AUUAUCUC CCUAACUCCCCCGAUAUUAG   GUGAU AAU U GUUUCCC        C                    UGA     A   U
Stem-loop sequence	AAGCUAAUGGAGUGGAUUGAGGGGGCUAUAAUCUUGUACUACUUAAUUUUAAAUAGUGAGUGAUUAUAGCCCCCUCAAUCCCCUCUAUUACCCUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166488.1	ncRNA:21   GUUUCCCAUUAUCUCCCCUAA   1   **||||||||||||||||||| targets:17   GUAAGGGUAAUAGAGGGGAUU   37 Target Full Sequence	0.0	Sequence 4152 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238157.1	ncRNA:21   GUUUCCCAUUAUCUCCCCUAA   1   **||||||||||||||||||| targets:17   GUAAGGGUAAUAGAGGGGAUU   37 Target Full Sequence	0.0	Sequence 4152 from Patent EP2985353	NA	coding protein	psRNATarget
HI406027.1	ncRNA:21   GUUUCCCAUUAUCUCCCCUAA   1   **||||||||||||||||||| targets:17   GUAAGGGUAAUAGAGGGGAUU   37 Target Full Sequence	0.0	Sequence 4152 from Patent EP2074227	NA	coding protein	psRNATarget
BT062966.1	ncRNA:21   GUUUCCCAUUAUCUCCCCUAA   1   **||||||||||||||||||| targets:2553   GUAAGGGUAAUAGAGGGGAUU   2573 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0013E16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174804.1	ncRNA:21   GUUUCCCAUUAUCUCCCCUAA   1   **||||||||||||||||||| targets:2553   GUAAGGGUAAUAGAGGGGAUU   2573 Target Full Sequence	0.0	Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), mRNA	NA	coding protein	psRNATarget
XM_008663899.2	ncRNA:21   GUUUCCCAUUAUCUCCCCUAA   1   **||||||||||||||||||| targets:2641   GUAAGGGUAAUAGAGGGGAUU   2661 Target Full Sequence	0.0	PREDICTED: Zea mays Eukaryotic translation initiation factor isoform 4G-2 (umc1280), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ054947.1	ncRNA:21   GUUUCCCAUUAUCUCCCCUAA   1   **|||*|||||=||||||||| targets:3   ACAAGAGUAAUGGAGGGGAUU   23 Target Full Sequence	2.5	TSA: Zea mays contig56069, mRNA sequence	NA	coding protein	psRNATarget