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BaseInfo

ncRNA ID novel_zma_miR10497
Species Zea mays
Class miRNA
Genome position Chr1:98523179-98523225 [-]
Reference genome RefGen_v4
Source SRR5100248;SRR1583942
Length 21
Mature sequence(if miRNA) 27 - CAUUUCUGACUCGCCCGAGGG - 47
Stem-loop(if miRNA) -CA     -  - -         G
   UUUCU GA C UCGCCCGAG G
   ||||| || | ||||||||| C
   GAAGA CU G AGCGGGCUC A
GGG     U  C U         U
Stem-loop sequence CAUUUCUGACUCGCCCGAGGGCAUCUCGGGCGAUGCUCUAGAAGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU956116.1
ncRNA:21   GGGAGCCCGCUCAGUCUUUAC   1
  =|||||*|*||||||||||||
targets:72   UCCUCGAGAGAGUCAGAAAUG   92

2.5 Zea mays clone 1557644 phi-1-like phosphate-induced protein mRNA, complete cds NA coding protein psRNATarget
NM_001154171.1
ncRNA:21   GGGAGCCCGCUCAGUCUUUAC   1
  =|||||*|*||||||||||||
targets:72   UCCUCGAGAGAGUCAGAAAUG   92

2.5 Zea mays phi-1-like phosphate-induced protein (LOC100281252), mRNA NA coding protein psRNATarget