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BaseInfo

ncRNA ID novel_zma_miR10493
Species Zea mays
Class miRNA
Genome position Chr7:92122157-92122225 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 46 - AUUUGCCGAGUGCCAGAUCGCGGG - 69
Stem-loop(if miRNA) --A A                  GAAUA      A
   G GAUCUGGCACUCGGCAAA     UUUUAA A
   | ||||||||||||||||||     ||||||
   C CUAGACCGUGAGCCGUUU     AAAAUU U
GGG G                  -AAAA      U
Stem-loop sequence AGAGAUCUGGCACUCGGCAAAGAAUAUUUUAAAAUUUUAAAAAAAAUUUGCCGAGUGCCAGAUCGCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ067174.1
ncRNA:24   GGGCGCUAGACCGUGAGCCGUUUA   1
  |=*|=|=*|||||||||||||||*
targets:11   CUGGUGGACUGGCACUCGGCAAAG   34

3.0 TSA: Zea mays contig02808, mRNA sequence NA coding protein psRNATarget
JB167202.1
ncRNA:24   GGGCGCUAGACCGUGAGCCGUUUA   1
  *|=|*|*|=||||||||||||||*
targets:112   GCUGGGCUUUGGCACUCGGCAAAG   135

3.0 Sequence 4866 from Patent EP2559767 NA coding protein psRNATarget
LQ238871.1
ncRNA:24   GGGCGCUAGACCGUGAGCCGUUUA   1
  *|=|*|*|=||||||||||||||*
targets:112   GCUGGGCUUUGGCACUCGGCAAAG   135

3.0 Sequence 4866 from Patent EP2985353 NA coding protein psRNATarget
HI406741.1
ncRNA:24   GGGCGCUAGACCGUGAGCCGUUUA   1
  *|=|*|*|=||||||||||||||*
targets:112   GCUGGGCUUUGGCACUCGGCAAAG   135

3.0 Sequence 4866 from Patent EP2074227 NA coding protein psRNATarget
JB167100.1
ncRNA:24   GGGC------GCUAGACCGUGAGCCGUUUA   1
  *|||------=|=|*||||||||||||||*
targets:134   GCCGAGUGCUUGGUAUGGCACUCGGCAAAG   163

3.0 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   GGGC------GCUAGACCGUGAGCCGUUUA   1
  *|||------=|=|*||||||||||||||*
targets:134   GCCGAGUGCUUGGUAUGGCACUCGGCAAAG   163

3.0 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   GGGC------GCUAGACCGUGAGCCGUUUA   1
  *|||------=|=|*||||||||||||||*
targets:134   GCCGAGUGCUUGGUAUGGCACUCGGCAAAG   163

3.0 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget